RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
CACNA1C-228ENST00000492150 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
CACNA1C-228ENST00000492150 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
CACNA1C-228ENST00000492150 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CACNA1C-228ENST00000492150 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CACNA1C-228ENST00000492150 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
CACNA1C-228ENST00000492150 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
CACNA1C-228ENST00000492150 SMIM20Q8N5G0 67 aa3.83□□□□□ -1.8
CACNA1C-228ENST00000492150 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
CACNA1C-228ENST00000492150 A0A1B0GU33 70 aa3.79□□□□□ -1.8
CACNA1C-228ENST00000492150 SEC61GP60059 68 aa3.79□□□□□ -1.8
CACNA1C-228ENST00000492150 TNP1P09430 55 aa3.78□□□□□ -1.8
CACNA1C-228ENST00000492150 COA5Q86WW8 74 aa3.76□□□□□ -1.81
CACNA1C-228ENST00000492150 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
CACNA1C-228ENST00000492150 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
CACNA1C-228ENST00000492150 ANAPC13Q9BS18 74 aa3.73□□□□□ -1.81
CACNA1C-228ENST00000492150 COX7CP15954 63 aa3.71□□□□□ -1.82
CACNA1C-228ENST00000492150 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
CACNA1C-228ENST00000492150 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CACNA1C-228ENST00000492150 A8MU10 97 aa3.69□□□□□ -1.82
CACNA1C-228ENST00000492150 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
CACNA1C-228ENST00000492150 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
CACNA1C-228ENST00000492150 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
CACNA1C-228ENST00000492150 H7BZZ5 65 aa3.61□□□□□ -1.83
CACNA1C-228ENST00000492150 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
CACNA1C-228ENST00000492150 A0A1B0GU69 56 aa3.55□□□□□ -1.84
CACNA1C-228ENST00000492150 PCP4P48539 62 aa3.54□□□□□ -1.84
CACNA1C-228ENST00000492150 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
CACNA1C-228ENST00000492150 TMEM258P61165 79 aa3.51□□□□□ -1.85
CACNA1C-228ENST00000492150 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
CACNA1C-228ENST00000492150 MT1AP04731 61 aa3.49□□□□□ -1.85
CACNA1C-228ENST00000492150 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
CACNA1C-228ENST00000492150 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
CACNA1C-228ENST00000492150 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CACNA1C-228ENST00000492150 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
CACNA1C-228ENST00000492150 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
CACNA1C-228ENST00000492150 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
CACNA1C-228ENST00000492150 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CACNA1C-228ENST00000492150 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
CACNA1C-228ENST00000492150 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
CACNA1C-228ENST00000492150 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
CACNA1C-228ENST00000492150 V9GYY9 64 aa3.26□□□□□ -1.89
CACNA1C-228ENST00000492150 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
CACNA1C-228ENST00000492150 Q1T7F1 81 aa3.25□□□□□ -1.89
CACNA1C-228ENST00000492150 PSPHP1O15172 72 aa3.23□□□□□ -1.89
CACNA1C-228ENST00000492150 UQCR11O14957 56 aa3.22□□□□□ -1.89
CACNA1C-228ENST00000492150 MT3P25713 68 aa3.2□□□□□ -1.9
CACNA1C-228ENST00000492150 A6NED7 52 aa3.14□□□□□ -1.91
CACNA1C-228ENST00000492150 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
CACNA1C-228ENST00000492150 K7ERS5 55 aa3.09□□□□□ -1.91
CACNA1C-228ENST00000492150 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CACNA1C-228ENST00000492150 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
CACNA1C-228ENST00000492150 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
CACNA1C-228ENST00000492150 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
CACNA1C-228ENST00000492150 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
CACNA1C-228ENST00000492150 ROMO1P60602 79 aa2.88□□□□□ -1.95
CACNA1C-228ENST00000492150 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CACNA1C-228ENST00000492150 H3BS24 57 aa2.87□□□□□ -1.95
CACNA1C-228ENST00000492150 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CACNA1C-228ENST00000492150 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CACNA1C-228ENST00000492150 PMAIP1Q13794 54 aa2.8□□□□□ -1.96
CACNA1C-228ENST00000492150 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
CACNA1C-228ENST00000492150 PRAC1Q96KF2 57 aa2.65□□□□□ -1.99
CACNA1C-228ENST00000492150 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
CACNA1C-228ENST00000492150 SVIPQ8NHG7 77 aa2.6□□□□□ -1.99
CACNA1C-228ENST00000492150 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CACNA1C-228ENST00000492150 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
CACNA1C-228ENST00000492150 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
CACNA1C-228ENST00000492150 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CACNA1C-228ENST00000492150 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
CACNA1C-228ENST00000492150 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
CACNA1C-228ENST00000492150 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
CACNA1C-228ENST00000492150 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
CACNA1C-228ENST00000492150 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
CACNA1C-228ENST00000492150 A0A0A0MQY5 61 aa1.72□□□□□ -2.13
CACNA1C-228ENST00000492150 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
CACNA1C-228ENST00000492150 INE1O15225 51 aa1.64□□□□□ -2.15
CACNA1C-228ENST00000492150 PRM1P04553 51 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms