RNA–Protein interactions for RNA: ENST00000492013.1

RTKN-210, Transcript of rhotekin, humanhuman

TSL 2

Gene RTKN, Length 853 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-210ENST00000492013 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
RTKN-210ENST00000492013 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
RTKN-210ENST00000492013 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
RTKN-210ENST00000492013 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
RTKN-210ENST00000492013 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
RTKN-210ENST00000492013 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
RTKN-210ENST00000492013 MT1EP04732 61 aa4.55□□□□□ -1.68
RTKN-210ENST00000492013 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
RTKN-210ENST00000492013 NEBP20929 6669 aa4.53□□□□□ -1.68
RTKN-210ENST00000492013 KMT2DO14686 5537 aa4.51□□□□□ -1.69
RTKN-210ENST00000492013 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
RTKN-210ENST00000492013 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
RTKN-210ENST00000492013 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
RTKN-210ENST00000492013 MT1LQ93083 61 aa4.47□□□□□ -1.69
RTKN-210ENST00000492013 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
RTKN-210ENST00000492013 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
RTKN-210ENST00000492013 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
RTKN-210ENST00000492013 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
RTKN-210ENST00000492013 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
RTKN-210ENST00000492013 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
RTKN-210ENST00000492013 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
RTKN-210ENST00000492013 MT1GP13640 62 aa4.35□□□□□ -1.71
RTKN-210ENST00000492013 MT1MQ8N339 61 aa4.3□□□□□ -1.72
RTKN-210ENST00000492013 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
RTKN-210ENST00000492013 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
RTKN-210ENST00000492013 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
RTKN-210ENST00000492013 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
RTKN-210ENST00000492013 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
RTKN-210ENST00000492013 SPRR2EP22531 72 aa4.23□□□□□ -1.73
RTKN-210ENST00000492013 SPRR2BP35325 72 aa4.23□□□□□ -1.73
RTKN-210ENST00000492013 SPRR2AP35326 72 aa4.23□□□□□ -1.73
RTKN-210ENST00000492013 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
RTKN-210ENST00000492013 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
RTKN-210ENST00000492013 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
RTKN-210ENST00000492013 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
RTKN-210ENST00000492013 SPRR2DP22532 72 aa4.08□□□□□ -1.76
RTKN-210ENST00000492013 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
RTKN-210ENST00000492013 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
RTKN-210ENST00000492013 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
RTKN-210ENST00000492013 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
RTKN-210ENST00000492013 MT1AP04731 61 aa3.82□□□□□ -1.8
RTKN-210ENST00000492013 MT3P25713 68 aa3.82□□□□□ -1.8
RTKN-210ENST00000492013 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
RTKN-210ENST00000492013 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
RTKN-210ENST00000492013 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
RTKN-210ENST00000492013 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
RTKN-210ENST00000492013 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
RTKN-210ENST00000492013 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
RTKN-210ENST00000492013 INE1O15225 51 aa3.56□□□□□ -1.84
RTKN-210ENST00000492013 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
RTKN-210ENST00000492013 MT4P47944 62 aa3.51□□□□□ -1.85
RTKN-210ENST00000492013 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
RTKN-210ENST00000492013 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
RTKN-210ENST00000492013 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
RTKN-210ENST00000492013 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
RTKN-210ENST00000492013 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
RTKN-210ENST00000492013 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
RTKN-210ENST00000492013 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
RTKN-210ENST00000492013 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
RTKN-210ENST00000492013 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
RTKN-210ENST00000492013 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
RTKN-210ENST00000492013 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
RTKN-210ENST00000492013 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
RTKN-210ENST00000492013 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
RTKN-210ENST00000492013 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
RTKN-210ENST00000492013 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
RTKN-210ENST00000492013 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
RTKN-210ENST00000492013 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
RTKN-210ENST00000492013 PRM1P04553 51 aa2.84□□□□□ -1.95
RTKN-210ENST00000492013 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
RTKN-210ENST00000492013 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
RTKN-210ENST00000492013 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
RTKN-210ENST00000492013 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
RTKN-210ENST00000492013 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
RTKN-210ENST00000492013 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
RTKN-210ENST00000492013 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
RTKN-210ENST00000492013 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
RTKN-210ENST00000492013 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms