RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 KRTAP20-1Q3LI63 56 aa8.38□□□□□ -1.07
SCN5A-213ENST00000491944 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
SCN5A-213ENST00000491944 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
SCN5A-213ENST00000491944 MT1LQ93083 61 aa8.31□□□□□ -1.08
SCN5A-213ENST00000491944 KRTAP2-3P0C7H8 128 aa8.29□□□□□ -1.08
SCN5A-213ENST00000491944 KRTAP2-4Q9BYR9 128 aa8.29□□□□□ -1.08
SCN5A-213ENST00000491944 MT1GP13640 62 aa8.26□□□□□ -1.09
SCN5A-213ENST00000491944 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
SCN5A-213ENST00000491944 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
SCN5A-213ENST00000491944 MT1MQ8N339 61 aa8.14□□□□□ -1.11
SCN5A-213ENST00000491944 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
SCN5A-213ENST00000491944 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
SCN5A-213ENST00000491944 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
SCN5A-213ENST00000491944 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
SCN5A-213ENST00000491944 KRTAP4-3Q9BYR4 195 aa7.96□□□□□ -1.14
SCN5A-213ENST00000491944 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
SCN5A-213ENST00000491944 PRO0628Q9UI54 55 aa7.93□□□□□ -1.14
SCN5A-213ENST00000491944 KRTAP19-4Q3LI73 84 aa7.88□□□□□ -1.15
SCN5A-213ENST00000491944 DSTQ03001 7570 aaKnown RBP7.79□□□□□ -1.16
SCN5A-213ENST00000491944 LCE3CQ5T5A8 94 aa7.77□□□□□ -1.17
SCN5A-213ENST00000491944 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
SCN5A-213ENST00000491944 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
SCN5A-213ENST00000491944 LCE4AQ5TA78 99 aa7.46□□□□□ -1.21
SCN5A-213ENST00000491944 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.21
SCN5A-213ENST00000491944 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
SCN5A-213ENST00000491944 KRTAP5-4Q6L8H1 288 aa7.41□□□□□ -1.22
SCN5A-213ENST00000491944 KRTAP5-5Q701N2 237 aaPredicted RBP7.38□□□□□ -1.23
SCN5A-213ENST00000491944 MT4P47944 62 aa7.34□□□□□ -1.23
SCN5A-213ENST00000491944 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
SCN5A-213ENST00000491944 KRTAP9-6A8MVA2 160 aa7.31□□□□□ -1.24
SCN5A-213ENST00000491944 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
SCN5A-213ENST00000491944 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
SCN5A-213ENST00000491944 KRTAP12-4P60329 112 aa7.09□□□□□ -1.27
SCN5A-213ENST00000491944 HMCN1Q96RW7 5635 aa7.08□□□□□ -1.28
SCN5A-213ENST00000491944 MT1AP04731 61 aa7.08□□□□□ -1.28
SCN5A-213ENST00000491944 KRTAP6-1Q3LI64 71 aa7.01□□□□□ -1.29
SCN5A-213ENST00000491944 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
SCN5A-213ENST00000491944 KRTAP20-2Q3LI61 65 aa6.98□□□□□ -1.29
SCN5A-213ENST00000491944 SYNE1Q8NF91 8797 aaKnown RBP6.85□□□□□ -1.31
SCN5A-213ENST00000491944 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
SCN5A-213ENST00000491944 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
SCN5A-213ENST00000491944 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
SCN5A-213ENST00000491944 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
SCN5A-213ENST00000491944 KRTAP5-2Q701N4 177 aa6.59□□□□□ -1.35
SCN5A-213ENST00000491944 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
SCN5A-213ENST00000491944 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
SCN5A-213ENST00000491944 MT3P25713 68 aa6.44□□□□□ -1.38
SCN5A-213ENST00000491944 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
SCN5A-213ENST00000491944 KRTAP4-11Q9BYQ6 195 aa6.24□□□□□ -1.41
SCN5A-213ENST00000491944 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
SCN5A-213ENST00000491944 KRTAP5-8O75690 187 aa6□□□□□ -1.45
SCN5A-213ENST00000491944 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
SCN5A-213ENST00000491944 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
SCN5A-213ENST00000491944 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
SCN5A-213ENST00000491944 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.5
SCN5A-213ENST00000491944 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
SCN5A-213ENST00000491944 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
SCN5A-213ENST00000491944 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
SCN5A-213ENST00000491944 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
SCN5A-213ENST00000491944 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
SCN5A-213ENST00000491944 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.55
SCN5A-213ENST00000491944 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
SCN5A-213ENST00000491944 MUC5BQ9HC84 5762 aaPredicted RBP5.33□□□□□ -1.56
SCN5A-213ENST00000491944 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
SCN5A-213ENST00000491944 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
SCN5A-213ENST00000491944 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
SCN5A-213ENST00000491944 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
SCN5A-213ENST00000491944 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
SCN5A-213ENST00000491944 INE1O15225 51 aa4.65□□□□□ -1.67
SCN5A-213ENST00000491944 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
SCN5A-213ENST00000491944 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
SCN5A-213ENST00000491944 PRM1P04553 51 aa4.43□□□□□ -1.7
SCN5A-213ENST00000491944 H3BS24 57 aa4.35□□□□□ -1.71
SCN5A-213ENST00000491944 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
SCN5A-213ENST00000491944 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
SCN5A-213ENST00000491944 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
SCN5A-213ENST00000491944 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
SCN5A-213ENST00000491944 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 71.3 ms