RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
SS18L1-204ENST00000491916 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
SS18L1-204ENST00000491916 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SS18L1-204ENST00000491916 MT1LQ93083 61 aa5.43□□□□□ -1.54
SS18L1-204ENST00000491916 A6NED7 52 aa5.42□□□□□ -1.54
SS18L1-204ENST00000491916 MT1GP13640 62 aa5.42□□□□□ -1.54
SS18L1-204ENST00000491916 K7ERS5 55 aa5.39□□□□□ -1.55
SS18L1-204ENST00000491916 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
SS18L1-204ENST00000491916 MT1MQ8N339 61 aa5.36□□□□□ -1.55
SS18L1-204ENST00000491916 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
SS18L1-204ENST00000491916 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
SS18L1-204ENST00000491916 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
SS18L1-204ENST00000491916 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
SS18L1-204ENST00000491916 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
SS18L1-204ENST00000491916 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
SS18L1-204ENST00000491916 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
SS18L1-204ENST00000491916 ROMO1P60602 79 aa5.15□□□□□ -1.59
SS18L1-204ENST00000491916 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
SS18L1-204ENST00000491916 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
SS18L1-204ENST00000491916 H3BS24 57 aa5.07□□□□□ -1.6
SS18L1-204ENST00000491916 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
SS18L1-204ENST00000491916 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SS18L1-204ENST00000491916 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
SS18L1-204ENST00000491916 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
SS18L1-204ENST00000491916 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
SS18L1-204ENST00000491916 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
SS18L1-204ENST00000491916 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
SS18L1-204ENST00000491916 LCE1DQ5T752 114 aa5□□□□□ -1.61
SS18L1-204ENST00000491916 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
SS18L1-204ENST00000491916 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SS18L1-204ENST00000491916 MT4P47944 62 aa4.92□□□□□ -1.62
SS18L1-204ENST00000491916 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SS18L1-204ENST00000491916 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
SS18L1-204ENST00000491916 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
SS18L1-204ENST00000491916 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
SS18L1-204ENST00000491916 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
SS18L1-204ENST00000491916 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
SS18L1-204ENST00000491916 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SS18L1-204ENST00000491916 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
SS18L1-204ENST00000491916 MT1AP04731 61 aa4.61□□□□□ -1.67
SS18L1-204ENST00000491916 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SS18L1-204ENST00000491916 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
SS18L1-204ENST00000491916 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
SS18L1-204ENST00000491916 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
SS18L1-204ENST00000491916 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
SS18L1-204ENST00000491916 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
SS18L1-204ENST00000491916 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
SS18L1-204ENST00000491916 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SS18L1-204ENST00000491916 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
SS18L1-204ENST00000491916 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
SS18L1-204ENST00000491916 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
SS18L1-204ENST00000491916 MT3P25713 68 aa4.18□□□□□ -1.74
SS18L1-204ENST00000491916 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SS18L1-204ENST00000491916 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
SS18L1-204ENST00000491916 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
SS18L1-204ENST00000491916 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
SS18L1-204ENST00000491916 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SS18L1-204ENST00000491916 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
SS18L1-204ENST00000491916 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
SS18L1-204ENST00000491916 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SS18L1-204ENST00000491916 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SS18L1-204ENST00000491916 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SS18L1-204ENST00000491916 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
SS18L1-204ENST00000491916 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
SS18L1-204ENST00000491916 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SS18L1-204ENST00000491916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SS18L1-204ENST00000491916 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
SS18L1-204ENST00000491916 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
SS18L1-204ENST00000491916 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SS18L1-204ENST00000491916 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SS18L1-204ENST00000491916 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
SS18L1-204ENST00000491916 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
SS18L1-204ENST00000491916 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SS18L1-204ENST00000491916 PRM1P04553 51 aa2.66□□□□□ -1.98
SS18L1-204ENST00000491916 INE1O15225 51 aa2.58□□□□□ -2
SS18L1-204ENST00000491916 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
SS18L1-204ENST00000491916 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SS18L1-204ENST00000491916 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 49.9 ms