RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
LSS-210ENST00000491729 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
LSS-210ENST00000491729 INE1O15225 51 aa4.71□□□□□ -1.66
LSS-210ENST00000491729 MT1EP04732 61 aa4.69□□□□□ -1.66
LSS-210ENST00000491729 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
LSS-210ENST00000491729 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
LSS-210ENST00000491729 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
LSS-210ENST00000491729 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
LSS-210ENST00000491729 MT1LQ93083 61 aa4.58□□□□□ -1.68
LSS-210ENST00000491729 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
LSS-210ENST00000491729 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
LSS-210ENST00000491729 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
LSS-210ENST00000491729 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
LSS-210ENST00000491729 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
LSS-210ENST00000491729 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
LSS-210ENST00000491729 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
LSS-210ENST00000491729 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
LSS-210ENST00000491729 SPRR2EP22531 72 aa4.45□□□□□ -1.7
LSS-210ENST00000491729 SPRR2BP35325 72 aa4.45□□□□□ -1.7
LSS-210ENST00000491729 SPRR2AP35326 72 aa4.45□□□□□ -1.7
LSS-210ENST00000491729 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
LSS-210ENST00000491729 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
LSS-210ENST00000491729 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
LSS-210ENST00000491729 NEBP20929 6669 aa4.42□□□□□ -1.7
LSS-210ENST00000491729 MT1GP13640 62 aa4.42□□□□□ -1.7
LSS-210ENST00000491729 MT1MQ8N339 61 aa4.42□□□□□ -1.7
LSS-210ENST00000491729 SPRR2DP22532 72 aa4.27□□□□□ -1.73
LSS-210ENST00000491729 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
LSS-210ENST00000491729 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
LSS-210ENST00000491729 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
LSS-210ENST00000491729 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
LSS-210ENST00000491729 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
LSS-210ENST00000491729 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
LSS-210ENST00000491729 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
LSS-210ENST00000491729 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
LSS-210ENST00000491729 MT1AP04731 61 aa3.86□□□□□ -1.79
LSS-210ENST00000491729 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
LSS-210ENST00000491729 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
LSS-210ENST00000491729 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
LSS-210ENST00000491729 MT4P47944 62 aa3.78□□□□□ -1.8
LSS-210ENST00000491729 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
LSS-210ENST00000491729 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
LSS-210ENST00000491729 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
LSS-210ENST00000491729 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
LSS-210ENST00000491729 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
LSS-210ENST00000491729 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
LSS-210ENST00000491729 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
LSS-210ENST00000491729 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
LSS-210ENST00000491729 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
LSS-210ENST00000491729 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
LSS-210ENST00000491729 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
LSS-210ENST00000491729 MT3P25713 68 aa3.47□□□□□ -1.85
LSS-210ENST00000491729 PRM1P04553 51 aa3.4□□□□□ -1.87
LSS-210ENST00000491729 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
LSS-210ENST00000491729 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
LSS-210ENST00000491729 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
LSS-210ENST00000491729 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
LSS-210ENST00000491729 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
LSS-210ENST00000491729 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
LSS-210ENST00000491729 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
LSS-210ENST00000491729 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
LSS-210ENST00000491729 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
LSS-210ENST00000491729 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
LSS-210ENST00000491729 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
LSS-210ENST00000491729 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
LSS-210ENST00000491729 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
LSS-210ENST00000491729 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
LSS-210ENST00000491729 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
LSS-210ENST00000491729 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
LSS-210ENST00000491729 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
LSS-210ENST00000491729 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
LSS-210ENST00000491729 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
LSS-210ENST00000491729 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
LSS-210ENST00000491729 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
LSS-210ENST00000491729 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
LSS-210ENST00000491729 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
LSS-210ENST00000491729 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
LSS-210ENST00000491729 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms