RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
SPTAN1-208ENST00000491712 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
SPTAN1-208ENST00000491712 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SPTAN1-208ENST00000491712 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
SPTAN1-208ENST00000491712 UQCR11O14957 56 aa4.69□□□□□ -1.66
SPTAN1-208ENST00000491712 MT4P47944 62 aa4.67□□□□□ -1.66
SPTAN1-208ENST00000491712 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
SPTAN1-208ENST00000491712 V9GYY9 64 aa4.64□□□□□ -1.67
SPTAN1-208ENST00000491712 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
SPTAN1-208ENST00000491712 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
SPTAN1-208ENST00000491712 Q1T7F1 81 aa4.6□□□□□ -1.67
SPTAN1-208ENST00000491712 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
SPTAN1-208ENST00000491712 K7ERS5 55 aa4.58□□□□□ -1.68
SPTAN1-208ENST00000491712 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
SPTAN1-208ENST00000491712 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
SPTAN1-208ENST00000491712 PSPHP1O15172 72 aa4.54□□□□□ -1.68
SPTAN1-208ENST00000491712 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
SPTAN1-208ENST00000491712 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
SPTAN1-208ENST00000491712 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
SPTAN1-208ENST00000491712 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
SPTAN1-208ENST00000491712 A6NED7 52 aa4.42□□□□□ -1.7
SPTAN1-208ENST00000491712 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
SPTAN1-208ENST00000491712 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
SPTAN1-208ENST00000491712 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
SPTAN1-208ENST00000491712 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
SPTAN1-208ENST00000491712 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
SPTAN1-208ENST00000491712 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
SPTAN1-208ENST00000491712 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SPTAN1-208ENST00000491712 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
SPTAN1-208ENST00000491712 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
SPTAN1-208ENST00000491712 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
SPTAN1-208ENST00000491712 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
SPTAN1-208ENST00000491712 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
SPTAN1-208ENST00000491712 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
SPTAN1-208ENST00000491712 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
SPTAN1-208ENST00000491712 ROMO1P60602 79 aa4.16□□□□□ -1.74
SPTAN1-208ENST00000491712 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
SPTAN1-208ENST00000491712 MT1AP04731 61 aa4.08□□□□□ -1.76
SPTAN1-208ENST00000491712 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
SPTAN1-208ENST00000491712 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
SPTAN1-208ENST00000491712 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
SPTAN1-208ENST00000491712 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
SPTAN1-208ENST00000491712 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
SPTAN1-208ENST00000491712 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SPTAN1-208ENST00000491712 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SPTAN1-208ENST00000491712 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SPTAN1-208ENST00000491712 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
SPTAN1-208ENST00000491712 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
SPTAN1-208ENST00000491712 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
SPTAN1-208ENST00000491712 MT3P25713 68 aa3.77□□□□□ -1.81
SPTAN1-208ENST00000491712 H3BS24 57 aa3.76□□□□□ -1.81
SPTAN1-208ENST00000491712 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
SPTAN1-208ENST00000491712 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
SPTAN1-208ENST00000491712 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
SPTAN1-208ENST00000491712 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
SPTAN1-208ENST00000491712 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
SPTAN1-208ENST00000491712 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
SPTAN1-208ENST00000491712 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
SPTAN1-208ENST00000491712 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SPTAN1-208ENST00000491712 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
SPTAN1-208ENST00000491712 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
SPTAN1-208ENST00000491712 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
SPTAN1-208ENST00000491712 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
SPTAN1-208ENST00000491712 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SPTAN1-208ENST00000491712 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
SPTAN1-208ENST00000491712 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
SPTAN1-208ENST00000491712 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SPTAN1-208ENST00000491712 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
SPTAN1-208ENST00000491712 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SPTAN1-208ENST00000491712 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
SPTAN1-208ENST00000491712 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
SPTAN1-208ENST00000491712 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
SPTAN1-208ENST00000491712 INE1O15225 51 aa2.51□□□□□ -2.01
SPTAN1-208ENST00000491712 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SPTAN1-208ENST00000491712 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SPTAN1-208ENST00000491712 PRM1P04553 51 aa2.12□□□□□ -2.07
SPTAN1-208ENST00000491712 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SPTAN1-208ENST00000491712 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms