RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 MT1EP04732 61 aa7.99□□□□□ -1.13
VCPKMT-204ENST00000491402 SPRR2EP22531 72 aa7.98□□□□□ -1.13
VCPKMT-204ENST00000491402 SPRR2BP35325 72 aa7.98□□□□□ -1.13
VCPKMT-204ENST00000491402 SPRR2AP35326 72 aa7.98□□□□□ -1.13
VCPKMT-204ENST00000491402 LCE1AQ5T7P2 110 aa7.95□□□□□ -1.14
VCPKMT-204ENST00000491402 MT1LQ93083 61 aa7.76□□□□□ -1.17
VCPKMT-204ENST00000491402 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
VCPKMT-204ENST00000491402 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
VCPKMT-204ENST00000491402 SPRR2DP22532 72 aa7.71□□□□□ -1.18
VCPKMT-204ENST00000491402 LCE5AQ5TCM9 118 aa7.68□□□□□ -1.18
VCPKMT-204ENST00000491402 MT1GP13640 62 aa7.64□□□□□ -1.19
VCPKMT-204ENST00000491402 KRTAP20-1Q3LI63 56 aa7.63□□□□□ -1.19
VCPKMT-204ENST00000491402 KRTAP2-3P0C7H8 128 aa7.58□□□□□ -1.2
VCPKMT-204ENST00000491402 KRTAP2-4Q9BYR9 128 aa7.58□□□□□ -1.2
VCPKMT-204ENST00000491402 MT1MQ8N339 61 aa7.54□□□□□ -1.2
VCPKMT-204ENST00000491402 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
VCPKMT-204ENST00000491402 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.21
VCPKMT-204ENST00000491402 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
VCPKMT-204ENST00000491402 LCE3CQ5T5A8 94 aa7.44□□□□□ -1.22
VCPKMT-204ENST00000491402 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
VCPKMT-204ENST00000491402 KRTAP4-3Q9BYR4 195 aa7.37□□□□□ -1.23
VCPKMT-204ENST00000491402 KRTAP2-2Q9BYT5 123 aa7.37□□□□□ -1.23
VCPKMT-204ENST00000491402 KRTAP2-1Q9BYU5 128 aa7.37□□□□□ -1.23
VCPKMT-204ENST00000491402 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
VCPKMT-204ENST00000491402 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
VCPKMT-204ENST00000491402 H3BS24 57 aa7.08□□□□□ -1.28
VCPKMT-204ENST00000491402 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
VCPKMT-204ENST00000491402 KRTAP9-6A8MVA2 160 aa7.03□□□□□ -1.28
VCPKMT-204ENST00000491402 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
VCPKMT-204ENST00000491402 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
VCPKMT-204ENST00000491402 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
VCPKMT-204ENST00000491402 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
VCPKMT-204ENST00000491402 MT4P47944 62 aa6.73□□□□□ -1.33
VCPKMT-204ENST00000491402 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
VCPKMT-204ENST00000491402 HMCN1Q96RW7 5635 aa6.62□□□□□ -1.35
VCPKMT-204ENST00000491402 MT1AP04731 61 aa6.6□□□□□ -1.35
VCPKMT-204ENST00000491402 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
VCPKMT-204ENST00000491402 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
VCPKMT-204ENST00000491402 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
VCPKMT-204ENST00000491402 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
VCPKMT-204ENST00000491402 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
VCPKMT-204ENST00000491402 NDUFAF8A1L188 74 aa6.4□□□□□ -1.38
VCPKMT-204ENST00000491402 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
VCPKMT-204ENST00000491402 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
VCPKMT-204ENST00000491402 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
VCPKMT-204ENST00000491402 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
VCPKMT-204ENST00000491402 GPR98Q8WXG9 6306 aa6.1□□□□□ -1.43
VCPKMT-204ENST00000491402 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
VCPKMT-204ENST00000491402 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
VCPKMT-204ENST00000491402 MT3P25713 68 aa6□□□□□ -1.45
VCPKMT-204ENST00000491402 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
VCPKMT-204ENST00000491402 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
VCPKMT-204ENST00000491402 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
VCPKMT-204ENST00000491402 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.49
VCPKMT-204ENST00000491402 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
VCPKMT-204ENST00000491402 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
VCPKMT-204ENST00000491402 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
VCPKMT-204ENST00000491402 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
VCPKMT-204ENST00000491402 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
VCPKMT-204ENST00000491402 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.56
VCPKMT-204ENST00000491402 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
VCPKMT-204ENST00000491402 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
VCPKMT-204ENST00000491402 INE1O15225 51 aa5.3□□□□□ -1.56
VCPKMT-204ENST00000491402 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
VCPKMT-204ENST00000491402 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
VCPKMT-204ENST00000491402 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
VCPKMT-204ENST00000491402 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
VCPKMT-204ENST00000491402 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
VCPKMT-204ENST00000491402 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
VCPKMT-204ENST00000491402 PRM1P04553 51 aa4.46□□□□□ -1.7
VCPKMT-204ENST00000491402 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.7
VCPKMT-204ENST00000491402 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
VCPKMT-204ENST00000491402 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
VCPKMT-204ENST00000491402 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
VCPKMT-204ENST00000491402 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
VCPKMT-204ENST00000491402 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
VCPKMT-204ENST00000491402 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
VCPKMT-204ENST00000491402 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 44.6 ms