RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
SOX2-OT-212ENST00000491282 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
SOX2-OT-212ENST00000491282 A8MU10 97 aa4.46□□□□□ -1.7
SOX2-OT-212ENST00000491282 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
SOX2-OT-212ENST00000491282 SPRR2DP22532 72 aa4.41□□□□□ -1.7
SOX2-OT-212ENST00000491282 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
SOX2-OT-212ENST00000491282 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
SOX2-OT-212ENST00000491282 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
SOX2-OT-212ENST00000491282 Q1T7F1 81 aa4.31□□□□□ -1.72
SOX2-OT-212ENST00000491282 UQCR11O14957 56 aa4.3□□□□□ -1.72
SOX2-OT-212ENST00000491282 PSPHP1O15172 72 aa4.29□□□□□ -1.72
SOX2-OT-212ENST00000491282 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
SOX2-OT-212ENST00000491282 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
SOX2-OT-212ENST00000491282 MT1EP04732 61 aa4.26□□□□□ -1.73
SOX2-OT-212ENST00000491282 V9GYY9 64 aa4.26□□□□□ -1.73
SOX2-OT-212ENST00000491282 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
SOX2-OT-212ENST00000491282 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
SOX2-OT-212ENST00000491282 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
SOX2-OT-212ENST00000491282 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
SOX2-OT-212ENST00000491282 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SOX2-OT-212ENST00000491282 TNP1P09430 55 aa4.15□□□□□ -1.75
SOX2-OT-212ENST00000491282 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
SOX2-OT-212ENST00000491282 A6NED7 52 aa4.11□□□□□ -1.75
SOX2-OT-212ENST00000491282 MT1GP13640 62 aa4.11□□□□□ -1.75
SOX2-OT-212ENST00000491282 MT1LQ93083 61 aa4.08□□□□□ -1.76
SOX2-OT-212ENST00000491282 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
SOX2-OT-212ENST00000491282 K7ERS5 55 aa4.05□□□□□ -1.76
SOX2-OT-212ENST00000491282 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
SOX2-OT-212ENST00000491282 MT1MQ8N339 61 aa4.05□□□□□ -1.76
SOX2-OT-212ENST00000491282 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SOX2-OT-212ENST00000491282 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
SOX2-OT-212ENST00000491282 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
SOX2-OT-212ENST00000491282 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
SOX2-OT-212ENST00000491282 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
SOX2-OT-212ENST00000491282 ROMO1P60602 79 aa3.88□□□□□ -1.79
SOX2-OT-212ENST00000491282 MT4P47944 62 aa3.87□□□□□ -1.79
SOX2-OT-212ENST00000491282 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
SOX2-OT-212ENST00000491282 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
SOX2-OT-212ENST00000491282 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
SOX2-OT-212ENST00000491282 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
SOX2-OT-212ENST00000491282 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SOX2-OT-212ENST00000491282 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
SOX2-OT-212ENST00000491282 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SOX2-OT-212ENST00000491282 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
SOX2-OT-212ENST00000491282 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
SOX2-OT-212ENST00000491282 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
SOX2-OT-212ENST00000491282 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SOX2-OT-212ENST00000491282 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
SOX2-OT-212ENST00000491282 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
SOX2-OT-212ENST00000491282 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
SOX2-OT-212ENST00000491282 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
SOX2-OT-212ENST00000491282 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SOX2-OT-212ENST00000491282 MT1AP04731 61 aa3.46□□□□□ -1.86
SOX2-OT-212ENST00000491282 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
SOX2-OT-212ENST00000491282 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SOX2-OT-212ENST00000491282 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
SOX2-OT-212ENST00000491282 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
SOX2-OT-212ENST00000491282 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SOX2-OT-212ENST00000491282 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
SOX2-OT-212ENST00000491282 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SOX2-OT-212ENST00000491282 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
SOX2-OT-212ENST00000491282 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
SOX2-OT-212ENST00000491282 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
SOX2-OT-212ENST00000491282 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
SOX2-OT-212ENST00000491282 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SOX2-OT-212ENST00000491282 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SOX2-OT-212ENST00000491282 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SOX2-OT-212ENST00000491282 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SOX2-OT-212ENST00000491282 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SOX2-OT-212ENST00000491282 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SOX2-OT-212ENST00000491282 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
SOX2-OT-212ENST00000491282 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SOX2-OT-212ENST00000491282 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
SOX2-OT-212ENST00000491282 PRM1P04553 51 aa2.02□□□□□ -2.09
SOX2-OT-212ENST00000491282 INE1O15225 51 aa1.91□□□□□ -2.1
SOX2-OT-212ENST00000491282 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SOX2-OT-212ENST00000491282 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 41.9 ms