RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
SBDS-204ENST00000490953 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
SBDS-204ENST00000490953 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
SBDS-204ENST00000490953 MT1LQ93083 61 aa6.5□□□□□ -1.37
SBDS-204ENST00000490953 MT1MQ8N339 61 aa6.49□□□□□ -1.37
SBDS-204ENST00000490953 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
SBDS-204ENST00000490953 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
SBDS-204ENST00000490953 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
SBDS-204ENST00000490953 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
SBDS-204ENST00000490953 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
SBDS-204ENST00000490953 TMEM258P61165 79 aa6.33□□□□□ -1.4
SBDS-204ENST00000490953 MT4P47944 62 aa6.31□□□□□ -1.4
SBDS-204ENST00000490953 UQCR11O14957 56 aa6.3□□□□□ -1.4
SBDS-204ENST00000490953 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
SBDS-204ENST00000490953 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
SBDS-204ENST00000490953 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
SBDS-204ENST00000490953 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
SBDS-204ENST00000490953 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
SBDS-204ENST00000490953 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
SBDS-204ENST00000490953 K7ERS5 55 aa6.07□□□□□ -1.44
SBDS-204ENST00000490953 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
SBDS-204ENST00000490953 PSPHP1O15172 72 aa6□□□□□ -1.45
SBDS-204ENST00000490953 V9GYY9 64 aa6□□□□□ -1.45
SBDS-204ENST00000490953 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
SBDS-204ENST00000490953 H3BS24 57 aa5.96□□□□□ -1.46
SBDS-204ENST00000490953 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
SBDS-204ENST00000490953 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
SBDS-204ENST00000490953 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SBDS-204ENST00000490953 Q1T7F1 81 aa5.93□□□□□ -1.46
SBDS-204ENST00000490953 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
SBDS-204ENST00000490953 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
SBDS-204ENST00000490953 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
SBDS-204ENST00000490953 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
SBDS-204ENST00000490953 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
SBDS-204ENST00000490953 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
SBDS-204ENST00000490953 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
SBDS-204ENST00000490953 A6NED7 52 aa5.8□□□□□ -1.48
SBDS-204ENST00000490953 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
SBDS-204ENST00000490953 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
SBDS-204ENST00000490953 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
SBDS-204ENST00000490953 ROMO1P60602 79 aa5.63□□□□□ -1.51
SBDS-204ENST00000490953 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
SBDS-204ENST00000490953 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
SBDS-204ENST00000490953 MT1AP04731 61 aa5.53□□□□□ -1.52
SBDS-204ENST00000490953 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
SBDS-204ENST00000490953 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
SBDS-204ENST00000490953 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
SBDS-204ENST00000490953 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
SBDS-204ENST00000490953 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
SBDS-204ENST00000490953 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
SBDS-204ENST00000490953 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
SBDS-204ENST00000490953 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
SBDS-204ENST00000490953 MT3P25713 68 aa5.06□□□□□ -1.6
SBDS-204ENST00000490953 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
SBDS-204ENST00000490953 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
SBDS-204ENST00000490953 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
SBDS-204ENST00000490953 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.63
SBDS-204ENST00000490953 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
SBDS-204ENST00000490953 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
SBDS-204ENST00000490953 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
SBDS-204ENST00000490953 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
SBDS-204ENST00000490953 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
SBDS-204ENST00000490953 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
SBDS-204ENST00000490953 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SBDS-204ENST00000490953 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
SBDS-204ENST00000490953 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
SBDS-204ENST00000490953 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
SBDS-204ENST00000490953 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
SBDS-204ENST00000490953 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
SBDS-204ENST00000490953 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
SBDS-204ENST00000490953 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
SBDS-204ENST00000490953 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SBDS-204ENST00000490953 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
SBDS-204ENST00000490953 INE1O15225 51 aa3.43□□□□□ -1.86
SBDS-204ENST00000490953 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SBDS-204ENST00000490953 PRM1P04553 51 aa2.88□□□□□ -1.95
SBDS-204ENST00000490953 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SBDS-204ENST00000490953 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 50.4 ms