RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	SERP1	Q9Y6X1	66 aa		5.12	□□□□□ -1.59
AGAP3-222	ENST00000490839		A0A1B0GU33	70 aa		5.07	□□□□□ -1.6
AGAP3-222	ENST00000490839	KRTAP4-7	Q9BYR0	210 aa		5.07	□□□□□ -1.6
AGAP3-222	ENST00000490839	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.06	□□□□□ -1.6
AGAP3-222	ENST00000490839	TNP1	P09430	55 aa		5.05	□□□□□ -1.6
AGAP3-222	ENST00000490839	COA5	Q86WW8	74 aa		5.05	□□□□□ -1.6
AGAP3-222	ENST00000490839	PCP4	P48539	62 aa		5.04	□□□□□ -1.6
AGAP3-222	ENST00000490839	KRTAP12-4	P60329	112 aa		5.03	□□□□□ -1.6
AGAP3-222	ENST00000490839	CCDC179	H3BU77	68 aa		5.01	□□□□□ -1.61
AGAP3-222	ENST00000490839		H7BZZ5	65 aa		4.96	□□□□□ -1.62
AGAP3-222	ENST00000490839	KRTAP12-3	P60328	96 aa		4.96	□□□□□ -1.62
AGAP3-222	ENST00000490839	SYNE1	Q8NF91	8797 aa	Known RBP	4.95	□□□□□ -1.62
AGAP3-222	ENST00000490839	SMIM26	A0A096LP01	95 aa		4.95	□□□□□ -1.62
AGAP3-222	ENST00000490839	ATP5E	P56381	51 aa	Predicted RBP	4.95	□□□□□ -1.62
AGAP3-222	ENST00000490839	TMEM258	P61165	79 aa		4.94	□□□□□ -1.62
AGAP3-222	ENST00000490839		A8MU10	97 aa		4.89	□□□□□ -1.63
AGAP3-222	ENST00000490839	AHNAK	Q09666	5890 aa	Known RBP	4.86	□□□□□ -1.63
AGAP3-222	ENST00000490839	LOC100996750	A0A140TA64	210 aa		4.83	□□□□□ -1.64
AGAP3-222	ENST00000490839	KRTAP4-11	Q9BYQ6	195 aa		4.83	□□□□□ -1.64
AGAP3-222	ENST00000490839		A0A1B0GU69	56 aa		4.79	□□□□□ -1.64
AGAP3-222	ENST00000490839	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.77	□□□□□ -1.65
AGAP3-222	ENST00000490839	MUC5AC	P98088	5654 aa		4.77	□□□□□ -1.65
AGAP3-222	ENST00000490839	RPS28	P62857	69 aa	Known RBP	4.73	□□□□□ -1.65
AGAP3-222	ENST00000490839	KRTAP5-2	Q701N4	177 aa		4.71	□□□□□ -1.66
AGAP3-222	ENST00000490839	KRTAP5-8	O75690	187 aa		4.67	□□□□□ -1.66
AGAP3-222	ENST00000490839	KRTAP19-4	Q3LI73	84 aa		4.67	□□□□□ -1.66
AGAP3-222	ENST00000490839		V9GYY9	64 aa		4.64	□□□□□ -1.67
AGAP3-222	ENST00000490839	MT1A	P04731	61 aa		4.59	□□□□□ -1.67
AGAP3-222	ENST00000490839	PRR15L	Q9BU68	103 aa		4.58	□□□□□ -1.68
AGAP3-222	ENST00000490839	LINC01558	Q9Y6Z2	57 aa		4.58	□□□□□ -1.68
AGAP3-222	ENST00000490839		Q1T7F1	81 aa		4.57	□□□□□ -1.68
AGAP3-222	ENST00000490839	KRTAP25-1	Q3LHN0	102 aa		4.56	□□□□□ -1.68
AGAP3-222	ENST00000490839	KRTAP6-1	Q3LI64	71 aa		4.56	□□□□□ -1.68
AGAP3-222	ENST00000490839	OBSCN	Q5VST9	7968 aa		4.56	□□□□□ -1.68
AGAP3-222	ENST00000490839	LCE3C	Q5T5A8	94 aa		4.52	□□□□□ -1.69
AGAP3-222	ENST00000490839	KRTAP9-9	Q9BYP9	154 aa		4.52	□□□□□ -1.69
AGAP3-222	ENST00000490839	KRTAP15-1	Q3LI76	137 aa		4.49	□□□□□ -1.69
AGAP3-222	ENST00000490839	KRTAP9-4	Q9BYQ2	154 aa		4.46	□□□□□ -1.7
AGAP3-222	ENST00000490839	KRTAP6-2	Q3LI66	62 aa		4.45	□□□□□ -1.7
AGAP3-222	ENST00000490839	UQCR11	O14957	56 aa		4.41	□□□□□ -1.7
AGAP3-222	ENST00000490839	PSPHP1	O15172	72 aa		4.41	□□□□□ -1.7
AGAP3-222	ENST00000490839	KRTAP23-1	A1A580	65 aa		4.36	□□□□□ -1.71
AGAP3-222	ENST00000490839		A6NED7	52 aa		4.34	□□□□□ -1.71
AGAP3-222	ENST00000490839	SVIP	Q8NHG7	77 aa		4.34	□□□□□ -1.71
AGAP3-222	ENST00000490839	MIR22HG	Q0VDD5	57 aa		4.32	□□□□□ -1.72
AGAP3-222	ENST00000490839	KRTAP5-1	Q6L8H4	278 aa		4.3	□□□□□ -1.72
AGAP3-222	ENST00000490839	KRTAP9-6	A8MVA2	160 aa		4.27	□□□□□ -1.73
AGAP3-222	ENST00000490839	CDC42SE1	Q9NRR8	79 aa		4.27	□□□□□ -1.73
AGAP3-222	ENST00000490839		K7ERS5	55 aa		4.25	□□□□□ -1.73
AGAP3-222	ENST00000490839	MT3	P25713	68 aa		4.22	□□□□□ -1.73
AGAP3-222	ENST00000490839	BRK1	Q8WUW1	75 aa		4.18	□□□□□ -1.74
AGAP3-222	ENST00000490839	PRO0628	Q9UI54	55 aa		4.07	□□□□□ -1.76
AGAP3-222	ENST00000490839	PMAIP1	Q13794	54 aa		3.98	□□□□□ -1.77
AGAP3-222	ENST00000490839	ROMO1	P60602	79 aa		3.97	□□□□□ -1.77
AGAP3-222	ENST00000490839	LCE1E	Q5T753	118 aa		3.97	□□□□□ -1.77
AGAP3-222	ENST00000490839	KTN1-AS1	Q86SY8	53 aa		3.79	□□□□□ -1.8
AGAP3-222	ENST00000490839	KRTAP4-2	Q9BYR5	136 aa		3.79	□□□□□ -1.8
AGAP3-222	ENST00000490839	LCE1B	Q5T7P3	118 aa		3.75	□□□□□ -1.81
AGAP3-222	ENST00000490839	LCE1C	Q5T751	118 aa		3.68	□□□□□ -1.82
AGAP3-222	ENST00000490839	PRAC1	Q96KF2	57 aa		3.64	□□□□□ -1.83
AGAP3-222	ENST00000490839	KRTAP4-12	Q9BQ66	201 aa		3.56	□□□□□ -1.84
AGAP3-222	ENST00000490839	KRTAP5-11	Q6L8G4	156 aa		3.42	□□□□□ -1.86
AGAP3-222	ENST00000490839		H3BS24	57 aa		3.39	□□□□□ -1.87
AGAP3-222	ENST00000490839	LCE1F	Q5T754	118 aa		3.39	□□□□□ -1.87
AGAP3-222	ENST00000490839	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.31	□□□□□ -1.88
AGAP3-222	ENST00000490839		A0A0A0MQY5	61 aa		3.26	□□□□□ -1.89
AGAP3-222	ENST00000490839	PHGR1	C9JFL3	82 aa		3.26	□□□□□ -1.89
AGAP3-222	ENST00000490839	LCE3D	Q9BYE3	92 aa		3.17	□□□□□ -1.9
AGAP3-222	ENST00000490839	LUZP6	Q538Z0	58 aa		3.13	□□□□□ -1.91
AGAP3-222	ENST00000490839	KRTAP21-2	Q3LI59	83 aa		3.02	□□□□□ -1.93
AGAP3-222	ENST00000490839	LCE3E	Q5T5B0	92 aa		2.91	□□□□□ -1.94
AGAP3-222	ENST00000490839	NDUFAF8	A1L188	74 aa		2.86	□□□□□ -1.95
AGAP3-222	ENST00000490839	MUC19	Q7Z5P9	8384 aa		2.84	□□□□□ -1.96
AGAP3-222	ENST00000490839	KRTAP4-4	Q9BYR3	166 aa		2.81	□□□□□ -1.96
AGAP3-222	ENST00000490839	KRTAP21-1	Q3LI58	79 aa		2.49	□□□□□ -2.01
AGAP3-222	ENST00000490839	INE1	O15225	51 aa		2.48	□□□□□ -2.01
AGAP3-222	ENST00000490839	PRM1	P04553	51 aa		2.01	□□□□□ -2.09
AGAP3-222	ENST00000490839	MUC16	Q8WXI7	14507 aa		1.94	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 1405.6 ms