RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
FN1-223ENST00000490833 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
FN1-223ENST00000490833 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
FN1-223ENST00000490833 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
FN1-223ENST00000490833 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
FN1-223ENST00000490833 MT1HP80294 61 aa2.72□□□□□ -1.97
FN1-223ENST00000490833 PRO2289Q9P1D8 64 aa2.71□□□□□ -1.98
FN1-223ENST00000490833 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
FN1-223ENST00000490833 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
FN1-223ENST00000490833 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
FN1-223ENST00000490833 MT2AP02795 61 aa2.66□□□□□ -1.98
FN1-223ENST00000490833 MT1FP04733 61 aa2.61□□□□□ -1.99
FN1-223ENST00000490833 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
FN1-223ENST00000490833 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
FN1-223ENST00000490833 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
FN1-223ENST00000490833 KRTAP10-12P60413 245 aa2.55□□□□□ -2
FN1-223ENST00000490833 MT1BP07438 61 aa2.54□□□□□ -2
FN1-223ENST00000490833 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
FN1-223ENST00000490833 MT1XP80297 61 aa2.51□□□□□ -2.01
FN1-223ENST00000490833 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
FN1-223ENST00000490833 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
FN1-223ENST00000490833 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
FN1-223ENST00000490833 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
FN1-223ENST00000490833 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
FN1-223ENST00000490833 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
FN1-223ENST00000490833 INE1O15225 51 aa2.39□□□□□ -2.03
FN1-223ENST00000490833 USH2AO75445 5202 aa2.36□□□□□ -2.03
FN1-223ENST00000490833 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
FN1-223ENST00000490833 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
FN1-223ENST00000490833 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
FN1-223ENST00000490833 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
FN1-223ENST00000490833 NEBP20929 6669 aa2.28□□□□□ -2.04
FN1-223ENST00000490833 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
FN1-223ENST00000490833 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
FN1-223ENST00000490833 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
FN1-223ENST00000490833 MT1EP04732 61 aa2.21□□□□□ -2.06
FN1-223ENST00000490833 MT1LQ93083 61 aa2.2□□□□□ -2.06
FN1-223ENST00000490833 MT1GP13640 62 aa2.19□□□□□ -2.06
FN1-223ENST00000490833 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
FN1-223ENST00000490833 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
FN1-223ENST00000490833 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
FN1-223ENST00000490833 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
FN1-223ENST00000490833 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
FN1-223ENST00000490833 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
FN1-223ENST00000490833 KMT2DO14686 5537 aa2.11□□□□□ -2.07
FN1-223ENST00000490833 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
FN1-223ENST00000490833 MT1MQ8N339 61 aa2.07□□□□□ -2.08
FN1-223ENST00000490833 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
FN1-223ENST00000490833 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
FN1-223ENST00000490833 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
FN1-223ENST00000490833 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
FN1-223ENST00000490833 MDN1Q9NU22 5596 aa2.03□□□□□ -2.09
FN1-223ENST00000490833 MT1AP04731 61 aa1.96□□□□□ -2.1
FN1-223ENST00000490833 SPRR2EP22531 72 aa1.93□□□□□ -2.1
FN1-223ENST00000490833 SPRR2BP35325 72 aa1.93□□□□□ -2.1
FN1-223ENST00000490833 SPRR2AP35326 72 aa1.93□□□□□ -2.1
FN1-223ENST00000490833 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
FN1-223ENST00000490833 SPRR2DP22532 72 aa1.87□□□□□ -2.11
FN1-223ENST00000490833 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
FN1-223ENST00000490833 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
FN1-223ENST00000490833 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
FN1-223ENST00000490833 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
FN1-223ENST00000490833 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
FN1-223ENST00000490833 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
FN1-223ENST00000490833 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
FN1-223ENST00000490833 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
FN1-223ENST00000490833 MT4P47944 62 aa1.68□□□□□ -2.14
FN1-223ENST00000490833 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
FN1-223ENST00000490833 PRM1P04553 51 aa1.59□□□□□ -2.15
FN1-223ENST00000490833 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
FN1-223ENST00000490833 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
FN1-223ENST00000490833 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
FN1-223ENST00000490833 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
FN1-223ENST00000490833 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
FN1-223ENST00000490833 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
FN1-223ENST00000490833 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
FN1-223ENST00000490833 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
FN1-223ENST00000490833 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms