RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 KRTAP5-4Q6L8H1 288 aa6.78□□□□□ -1.32
SREBF1-216ENST00000490796 PRR15LQ9BU68 103 aa6.77□□□□□ -1.33
SREBF1-216ENST00000490796 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
SREBF1-216ENST00000490796 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
SREBF1-216ENST00000490796 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
SREBF1-216ENST00000490796 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
SREBF1-216ENST00000490796 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
SREBF1-216ENST00000490796 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
SREBF1-216ENST00000490796 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
SREBF1-216ENST00000490796 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
SREBF1-216ENST00000490796 UQCR11O14957 56 aa6.49□□□□□ -1.37
SREBF1-216ENST00000490796 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
SREBF1-216ENST00000490796 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
SREBF1-216ENST00000490796 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
SREBF1-216ENST00000490796 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
SREBF1-216ENST00000490796 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
SREBF1-216ENST00000490796 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
SREBF1-216ENST00000490796 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
SREBF1-216ENST00000490796 K7ERS5 55 aa6.34□□□□□ -1.39
SREBF1-216ENST00000490796 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
SREBF1-216ENST00000490796 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
SREBF1-216ENST00000490796 TMEM258P61165 79 aa6.29□□□□□ -1.4
SREBF1-216ENST00000490796 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
SREBF1-216ENST00000490796 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
SREBF1-216ENST00000490796 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
SREBF1-216ENST00000490796 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SREBF1-216ENST00000490796 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
SREBF1-216ENST00000490796 PSPHP1O15172 72 aa6.06□□□□□ -1.44
SREBF1-216ENST00000490796 V9GYY9 64 aa6.06□□□□□ -1.44
SREBF1-216ENST00000490796 MT1AP04731 61 aa5.95□□□□□ -1.46
SREBF1-216ENST00000490796 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
SREBF1-216ENST00000490796 Q1T7F1 81 aa5.93□□□□□ -1.46
SREBF1-216ENST00000490796 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
SREBF1-216ENST00000490796 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
SREBF1-216ENST00000490796 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
SREBF1-216ENST00000490796 A6NED7 52 aa5.87□□□□□ -1.47
SREBF1-216ENST00000490796 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
SREBF1-216ENST00000490796 ROMO1P60602 79 aa5.78□□□□□ -1.48
SREBF1-216ENST00000490796 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
SREBF1-216ENST00000490796 AHNAKQ09666 5890 aaKnown RBP5.73□□□□□ -1.49
SREBF1-216ENST00000490796 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
SREBF1-216ENST00000490796 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
SREBF1-216ENST00000490796 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
SREBF1-216ENST00000490796 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
SREBF1-216ENST00000490796 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
SREBF1-216ENST00000490796 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
SREBF1-216ENST00000490796 PCP4P48539 62 aa5.61□□□□□ -1.51
SREBF1-216ENST00000490796 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
SREBF1-216ENST00000490796 MT3P25713 68 aa5.49□□□□□ -1.53
SREBF1-216ENST00000490796 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
SREBF1-216ENST00000490796 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
SREBF1-216ENST00000490796 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
SREBF1-216ENST00000490796 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SREBF1-216ENST00000490796 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
SREBF1-216ENST00000490796 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
SREBF1-216ENST00000490796 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SREBF1-216ENST00000490796 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
SREBF1-216ENST00000490796 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
SREBF1-216ENST00000490796 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
SREBF1-216ENST00000490796 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
SREBF1-216ENST00000490796 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
SREBF1-216ENST00000490796 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
SREBF1-216ENST00000490796 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
SREBF1-216ENST00000490796 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
SREBF1-216ENST00000490796 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SREBF1-216ENST00000490796 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
SREBF1-216ENST00000490796 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
SREBF1-216ENST00000490796 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
SREBF1-216ENST00000490796 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
SREBF1-216ENST00000490796 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SREBF1-216ENST00000490796 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
SREBF1-216ENST00000490796 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
SREBF1-216ENST00000490796 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SREBF1-216ENST00000490796 PRM1P04553 51 aa2.93□□□□□ -1.94
SREBF1-216ENST00000490796 A0A0A0MQY5 61 aa2.57□□□□□ -2
SREBF1-216ENST00000490796 INE1O15225 51 aa2.57□□□□□ -2
SREBF1-216ENST00000490796 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
SREBF1-216ENST00000490796 H3BS24 57 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 5.2 ms