RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
EPCAM-206ENST00000490733 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
EPCAM-206ENST00000490733 M0QZ58 72 aa2.14□□□□□ -2.07
EPCAM-206ENST00000490733 R4GN34 69 aa2.14□□□□□ -2.07
EPCAM-206ENST00000490733 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
EPCAM-206ENST00000490733 A6NN06 94 aa2.12□□□□□ -2.07
EPCAM-206ENST00000490733 MT1BP07438 61 aa2.12□□□□□ -2.07
EPCAM-206ENST00000490733 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
EPCAM-206ENST00000490733 UQCR11O14957 56 aa2.11□□□□□ -2.07
EPCAM-206ENST00000490733 A0A0D9SG42 100 aa2.1□□□□□ -2.07
EPCAM-206ENST00000490733 ROMO1P60602 79 aa2.09□□□□□ -2.07
EPCAM-206ENST00000490733 MIR22HGQ0VDD5 57 aa2.09□□□□□ -2.07
EPCAM-206ENST00000490733 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
EPCAM-206ENST00000490733 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
EPCAM-206ENST00000490733 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
EPCAM-206ENST00000490733 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
EPCAM-206ENST00000490733 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
EPCAM-206ENST00000490733 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
EPCAM-206ENST00000490733 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
EPCAM-206ENST00000490733 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
EPCAM-206ENST00000490733 MT1XP80297 61 aa2.03□□□□□ -2.08
EPCAM-206ENST00000490733 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
EPCAM-206ENST00000490733 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
EPCAM-206ENST00000490733 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
EPCAM-206ENST00000490733 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
EPCAM-206ENST00000490733 KMT2DO14686 5537 aa1.99□□□□□ -2.09
EPCAM-206ENST00000490733 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
EPCAM-206ENST00000490733 CRCT1Q9UGL9 99 aa1.99□□□□□ -2.09
EPCAM-206ENST00000490733 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
EPCAM-206ENST00000490733 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
EPCAM-206ENST00000490733 TNP1P09430 55 aa1.88□□□□□ -2.11
EPCAM-206ENST00000490733 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
EPCAM-206ENST00000490733 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
EPCAM-206ENST00000490733 NEBP20929 6669 aa1.83□□□□□ -2.12
EPCAM-206ENST00000490733 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
EPCAM-206ENST00000490733 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
EPCAM-206ENST00000490733 KRTAP19-5Q3LI72 72 aa1.81□□□□□ -2.12
EPCAM-206ENST00000490733 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
EPCAM-206ENST00000490733 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
EPCAM-206ENST00000490733 MT1EP04732 61 aa1.78□□□□□ -2.12
EPCAM-206ENST00000490733 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
EPCAM-206ENST00000490733 PP632Q6XCG6 107 aa1.78□□□□□ -2.12
EPCAM-206ENST00000490733 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
EPCAM-206ENST00000490733 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
EPCAM-206ENST00000490733 MT1LQ93083 61 aa1.73□□□□□ -2.13
EPCAM-206ENST00000490733 INE1O15225 51 aa1.72□□□□□ -2.13
EPCAM-206ENST00000490733 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
EPCAM-206ENST00000490733 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
EPCAM-206ENST00000490733 SPRR2EP22531 72 aa1.7□□□□□ -2.14
EPCAM-206ENST00000490733 SPRR2BP35325 72 aa1.7□□□□□ -2.14
EPCAM-206ENST00000490733 SPRR2AP35326 72 aa1.7□□□□□ -2.14
EPCAM-206ENST00000490733 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
EPCAM-206ENST00000490733 MT1GP13640 62 aa1.68□□□□□ -2.14
EPCAM-206ENST00000490733 MT1MQ8N339 61 aa1.68□□□□□ -2.14
EPCAM-206ENST00000490733 SPRR2DP22532 72 aa1.63□□□□□ -2.15
EPCAM-206ENST00000490733 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
EPCAM-206ENST00000490733 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
EPCAM-206ENST00000490733 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
EPCAM-206ENST00000490733 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
EPCAM-206ENST00000490733 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
EPCAM-206ENST00000490733 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
EPCAM-206ENST00000490733 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
EPCAM-206ENST00000490733 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
EPCAM-206ENST00000490733 MT1AP04731 61 aa1.46□□□□□ -2.18
EPCAM-206ENST00000490733 MT4P47944 62 aa1.43□□□□□ -2.18
EPCAM-206ENST00000490733 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
EPCAM-206ENST00000490733 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
EPCAM-206ENST00000490733 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
EPCAM-206ENST00000490733 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
EPCAM-206ENST00000490733 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
EPCAM-206ENST00000490733 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
EPCAM-206ENST00000490733 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
EPCAM-206ENST00000490733 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
EPCAM-206ENST00000490733 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
EPCAM-206ENST00000490733 PRM1P04553 51 aa1.01□□□□□ -2.25
EPCAM-206ENST00000490733 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
EPCAM-206ENST00000490733 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
EPCAM-206ENST00000490733 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 148.9 ms