RNA–Protein interactions for RNA: ENST00000490697.1

HDLBP-244, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-244ENST00000490697 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
HDLBP-244ENST00000490697 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
HDLBP-244ENST00000490697 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
HDLBP-244ENST00000490697 MT4P47944 62 aa6.12□□□□□ -1.43
HDLBP-244ENST00000490697 HMCN1Q96RW7 5635 aa6.11□□□□□ -1.43
HDLBP-244ENST00000490697 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
HDLBP-244ENST00000490697 UQCR11O14957 56 aa6.07□□□□□ -1.44
HDLBP-244ENST00000490697 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
HDLBP-244ENST00000490697 TMEM258P61165 79 aa6.03□□□□□ -1.44
HDLBP-244ENST00000490697 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
HDLBP-244ENST00000490697 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
HDLBP-244ENST00000490697 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
HDLBP-244ENST00000490697 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
HDLBP-244ENST00000490697 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.46
HDLBP-244ENST00000490697 PCP4P48539 62 aa5.88□□□□□ -1.47
HDLBP-244ENST00000490697 K7ERS5 55 aa5.84□□□□□ -1.47
HDLBP-244ENST00000490697 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
HDLBP-244ENST00000490697 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
HDLBP-244ENST00000490697 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
HDLBP-244ENST00000490697 V9GYY9 64 aa5.77□□□□□ -1.49
HDLBP-244ENST00000490697 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
HDLBP-244ENST00000490697 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
HDLBP-244ENST00000490697 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
HDLBP-244ENST00000490697 PSPHP1O15172 72 aa5.71□□□□□ -1.5
HDLBP-244ENST00000490697 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
HDLBP-244ENST00000490697 Q1T7F1 81 aa5.7□□□□□ -1.5
HDLBP-244ENST00000490697 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
HDLBP-244ENST00000490697 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
HDLBP-244ENST00000490697 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
HDLBP-244ENST00000490697 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
HDLBP-244ENST00000490697 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
HDLBP-244ENST00000490697 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
HDLBP-244ENST00000490697 A6NED7 52 aa5.52□□□□□ -1.53
HDLBP-244ENST00000490697 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
HDLBP-244ENST00000490697 ROMO1P60602 79 aa5.41□□□□□ -1.54
HDLBP-244ENST00000490697 MT1AP04731 61 aa5.37□□□□□ -1.55
HDLBP-244ENST00000490697 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
HDLBP-244ENST00000490697 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
HDLBP-244ENST00000490697 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
HDLBP-244ENST00000490697 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
HDLBP-244ENST00000490697 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
HDLBP-244ENST00000490697 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
HDLBP-244ENST00000490697 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
HDLBP-244ENST00000490697 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
HDLBP-244ENST00000490697 MT3P25713 68 aa4.94□□□□□ -1.62
HDLBP-244ENST00000490697 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
HDLBP-244ENST00000490697 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
HDLBP-244ENST00000490697 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
HDLBP-244ENST00000490697 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
HDLBP-244ENST00000490697 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
HDLBP-244ENST00000490697 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
HDLBP-244ENST00000490697 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
HDLBP-244ENST00000490697 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
HDLBP-244ENST00000490697 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HDLBP-244ENST00000490697 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
HDLBP-244ENST00000490697 H3BS24 57 aa4.52□□□□□ -1.69
HDLBP-244ENST00000490697 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
HDLBP-244ENST00000490697 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
HDLBP-244ENST00000490697 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
HDLBP-244ENST00000490697 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
HDLBP-244ENST00000490697 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
HDLBP-244ENST00000490697 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
HDLBP-244ENST00000490697 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
HDLBP-244ENST00000490697 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
HDLBP-244ENST00000490697 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
HDLBP-244ENST00000490697 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
HDLBP-244ENST00000490697 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
HDLBP-244ENST00000490697 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
HDLBP-244ENST00000490697 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
HDLBP-244ENST00000490697 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
HDLBP-244ENST00000490697 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
HDLBP-244ENST00000490697 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
HDLBP-244ENST00000490697 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
HDLBP-244ENST00000490697 INE1O15225 51 aa3.17□□□□□ -1.9
HDLBP-244ENST00000490697 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HDLBP-244ENST00000490697 PRM1P04553 51 aa2.74□□□□□ -1.97
HDLBP-244ENST00000490697 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
HDLBP-244ENST00000490697 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms