RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
SFPQ-210ENST00000490668 PRR15LQ9BU68 103 aa1.83□□□□□ -2.12
SFPQ-210ENST00000490668 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
SFPQ-210ENST00000490668 USH2AO75445 5202 aa1.8□□□□□ -2.12
SFPQ-210ENST00000490668 A0A0D9SG42 100 aa1.79□□□□□ -2.12
SFPQ-210ENST00000490668 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
SFPQ-210ENST00000490668 LINC01558Q9Y6Z2 57 aa1.79□□□□□ -2.12
SFPQ-210ENST00000490668 MT1XP80297 61 aa1.78□□□□□ -2.12
SFPQ-210ENST00000490668 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
SFPQ-210ENST00000490668 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
SFPQ-210ENST00000490668 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
SFPQ-210ENST00000490668 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
SFPQ-210ENST00000490668 UQCR11O14957 56 aa1.76□□□□□ -2.13
SFPQ-210ENST00000490668 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
SFPQ-210ENST00000490668 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
SFPQ-210ENST00000490668 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
SFPQ-210ENST00000490668 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
SFPQ-210ENST00000490668 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
SFPQ-210ENST00000490668 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
SFPQ-210ENST00000490668 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
SFPQ-210ENST00000490668 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
SFPQ-210ENST00000490668 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
SFPQ-210ENST00000490668 TNP1P09430 55 aa1.66□□□□□ -2.14
SFPQ-210ENST00000490668 SPRR2EP22531 72 aa1.63□□□□□ -2.15
SFPQ-210ENST00000490668 SPRR2BP35325 72 aa1.63□□□□□ -2.15
SFPQ-210ENST00000490668 SPRR2AP35326 72 aa1.63□□□□□ -2.15
SFPQ-210ENST00000490668 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
SFPQ-210ENST00000490668 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
SFPQ-210ENST00000490668 NEBP20929 6669 aa1.62□□□□□ -2.15
SFPQ-210ENST00000490668 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
SFPQ-210ENST00000490668 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
SFPQ-210ENST00000490668 MT1EP04732 61 aa1.58□□□□□ -2.16
SFPQ-210ENST00000490668 SPRR2DP22532 72 aa1.58□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
SFPQ-210ENST00000490668 KMT2DO14686 5537 aa1.55□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
SFPQ-210ENST00000490668 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
SFPQ-210ENST00000490668 MT1GP13640 62 aa1.52□□□□□ -2.17
SFPQ-210ENST00000490668 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
SFPQ-210ENST00000490668 MT1LQ93083 61 aa1.52□□□□□ -2.17
SFPQ-210ENST00000490668 MUC12Q9UKN1 5478 aa1.51□□□□□ -2.17
SFPQ-210ENST00000490668 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
SFPQ-210ENST00000490668 MT1MQ8N339 61 aa1.49□□□□□ -2.17
SFPQ-210ENST00000490668 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
SFPQ-210ENST00000490668 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
SFPQ-210ENST00000490668 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
SFPQ-210ENST00000490668 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
SFPQ-210ENST00000490668 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
SFPQ-210ENST00000490668 MT4P47944 62 aa1.36□□□□□ -2.19
SFPQ-210ENST00000490668 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
SFPQ-210ENST00000490668 DSTQ03001 7570 aaKnown RBP1.34□□□□□ -2.19
SFPQ-210ENST00000490668 MT1AP04731 61 aa1.3□□□□□ -2.2
SFPQ-210ENST00000490668 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
SFPQ-210ENST00000490668 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
SFPQ-210ENST00000490668 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
SFPQ-210ENST00000490668 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
SFPQ-210ENST00000490668 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
SFPQ-210ENST00000490668 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
SFPQ-210ENST00000490668 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
SFPQ-210ENST00000490668 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
SFPQ-210ENST00000490668 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
SFPQ-210ENST00000490668 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
SFPQ-210ENST00000490668 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
SFPQ-210ENST00000490668 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
SFPQ-210ENST00000490668 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
SFPQ-210ENST00000490668 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SFPQ-210ENST00000490668 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
SFPQ-210ENST00000490668 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
SFPQ-210ENST00000490668 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
SFPQ-210ENST00000490668 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
SFPQ-210ENST00000490668 PRM1P04553 51 aa0.8□□□□□ -2.28
SFPQ-210ENST00000490668 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
SFPQ-210ENST00000490668 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
SFPQ-210ENST00000490668 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms