RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
CSTF1-205ENST00000490539 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
CSTF1-205ENST00000490539 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
CSTF1-205ENST00000490539 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
CSTF1-205ENST00000490539 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
CSTF1-205ENST00000490539 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
CSTF1-205ENST00000490539 A0A1B0GU33 70 aa2.36□□□□□ -2.03
CSTF1-205ENST00000490539 H0YAA0 97 aa2.36□□□□□ -2.03
CSTF1-205ENST00000490539 H1FX-AS1Q4G0G2 97 aa2.36□□□□□ -2.03
CSTF1-205ENST00000490539 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
CSTF1-205ENST00000490539 K7ERS5 55 aa2.34□□□□□ -2.03
CSTF1-205ENST00000490539 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
CSTF1-205ENST00000490539 MT1HP80294 61 aa2.33□□□□□ -2.04
CSTF1-205ENST00000490539 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
CSTF1-205ENST00000490539 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
CSTF1-205ENST00000490539 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
CSTF1-205ENST00000490539 ROMO1P60602 79 aa2.26□□□□□ -2.05
CSTF1-205ENST00000490539 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
CSTF1-205ENST00000490539 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
CSTF1-205ENST00000490539 S4R3F8 94 aa2.24□□□□□ -2.05
CSTF1-205ENST00000490539 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
CSTF1-205ENST00000490539 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
CSTF1-205ENST00000490539 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
CSTF1-205ENST00000490539 A0A0D9SG42 100 aa2.19□□□□□ -2.06
CSTF1-205ENST00000490539 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
CSTF1-205ENST00000490539 CRIPTQ9P021 101 aa2.19□□□□□ -2.06
CSTF1-205ENST00000490539 MT2AP02795 61 aa2.18□□□□□ -2.06
CSTF1-205ENST00000490539 P0C880 135 aa2.18□□□□□ -2.06
CSTF1-205ENST00000490539 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
CSTF1-205ENST00000490539 M0QZ58 72 aa2.16□□□□□ -2.06
CSTF1-205ENST00000490539 MT1FP04733 61 aa2.16□□□□□ -2.06
CSTF1-205ENST00000490539 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CSTF1-205ENST00000490539 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
CSTF1-205ENST00000490539 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
CSTF1-205ENST00000490539 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
CSTF1-205ENST00000490539 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
CSTF1-205ENST00000490539 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
CSTF1-205ENST00000490539 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
CSTF1-205ENST00000490539 R4GN34 69 aa2.09□□□□□ -2.07
CSTF1-205ENST00000490539 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
CSTF1-205ENST00000490539 SPRR2GQ9BYE4 73 aa2.07□□□□□ -2.08
CSTF1-205ENST00000490539 PLAC4Q8WY50 150 aa2.06□□□□□ -2.08
CSTF1-205ENST00000490539 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
CSTF1-205ENST00000490539 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CSTF1-205ENST00000490539 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
CSTF1-205ENST00000490539 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
CSTF1-205ENST00000490539 MT1BP07438 61 aa1.98□□□□□ -2.09
CSTF1-205ENST00000490539 SPRR2EP22531 72 aa1.97□□□□□ -2.09
CSTF1-205ENST00000490539 SPRR2BP35325 72 aa1.97□□□□□ -2.09
CSTF1-205ENST00000490539 SPRR2AP35326 72 aa1.97□□□□□ -2.09
CSTF1-205ENST00000490539 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CSTF1-205ENST00000490539 TNP1P09430 55 aa1.92□□□□□ -2.1
CSTF1-205ENST00000490539 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CSTF1-205ENST00000490539 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
CSTF1-205ENST00000490539 MT1XP80297 61 aa1.89□□□□□ -2.11
CSTF1-205ENST00000490539 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
CSTF1-205ENST00000490539 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
CSTF1-205ENST00000490539 MT4P47944 62 aa1.74□□□□□ -2.13
CSTF1-205ENST00000490539 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CSTF1-205ENST00000490539 INE1O15225 51 aa1.72□□□□□ -2.13
CSTF1-205ENST00000490539 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
CSTF1-205ENST00000490539 MT1EP04732 61 aa1.68□□□□□ -2.14
CSTF1-205ENST00000490539 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
CSTF1-205ENST00000490539 MT1GP13640 62 aa1.67□□□□□ -2.14
CSTF1-205ENST00000490539 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
CSTF1-205ENST00000490539 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
CSTF1-205ENST00000490539 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
CSTF1-205ENST00000490539 MT1LQ93083 61 aa1.61□□□□□ -2.15
CSTF1-205ENST00000490539 MT1MQ8N339 61 aa1.59□□□□□ -2.15
CSTF1-205ENST00000490539 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
CSTF1-205ENST00000490539 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
CSTF1-205ENST00000490539 MT1AP04731 61 aa1.39□□□□□ -2.19
CSTF1-205ENST00000490539 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
CSTF1-205ENST00000490539 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
CSTF1-205ENST00000490539 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
CSTF1-205ENST00000490539 PRM1P04553 51 aa1.19□□□□□ -2.22
CSTF1-205ENST00000490539 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CSTF1-205ENST00000490539 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms