RNA–Protein interactions for RNA: ENST00000490514.5

TCTN1-215, Transcript of tectonic family member 1, humanhuman

TSL 2

Gene TCTN1, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-215ENST00000490514 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
TCTN1-215ENST00000490514 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
TCTN1-215ENST00000490514 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
TCTN1-215ENST00000490514 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
TCTN1-215ENST00000490514 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
TCTN1-215ENST00000490514 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
TCTN1-215ENST00000490514 MT1MQ8N339 61 aa6.22□□□□□ -1.41
TCTN1-215ENST00000490514 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
TCTN1-215ENST00000490514 MT1GP13640 62 aa6.2□□□□□ -1.42
TCTN1-215ENST00000490514 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
TCTN1-215ENST00000490514 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
TCTN1-215ENST00000490514 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
TCTN1-215ENST00000490514 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
TCTN1-215ENST00000490514 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
TCTN1-215ENST00000490514 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
TCTN1-215ENST00000490514 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
TCTN1-215ENST00000490514 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
TCTN1-215ENST00000490514 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
TCTN1-215ENST00000490514 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
TCTN1-215ENST00000490514 SPRR2EP22531 72 aa6.03□□□□□ -1.44
TCTN1-215ENST00000490514 SPRR2BP35325 72 aa6.03□□□□□ -1.44
TCTN1-215ENST00000490514 SPRR2AP35326 72 aa6.03□□□□□ -1.44
TCTN1-215ENST00000490514 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
TCTN1-215ENST00000490514 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
TCTN1-215ENST00000490514 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
TCTN1-215ENST00000490514 NEBP20929 6669 aa5.87□□□□□ -1.47
TCTN1-215ENST00000490514 SPRR2DP22532 72 aa5.8□□□□□ -1.48
TCTN1-215ENST00000490514 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
TCTN1-215ENST00000490514 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
TCTN1-215ENST00000490514 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
TCTN1-215ENST00000490514 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
TCTN1-215ENST00000490514 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
TCTN1-215ENST00000490514 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
TCTN1-215ENST00000490514 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
TCTN1-215ENST00000490514 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
TCTN1-215ENST00000490514 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
TCTN1-215ENST00000490514 MT1AP04731 61 aa5.47□□□□□ -1.53
TCTN1-215ENST00000490514 H3BS24 57 aa5.46□□□□□ -1.54
TCTN1-215ENST00000490514 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
TCTN1-215ENST00000490514 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
TCTN1-215ENST00000490514 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
TCTN1-215ENST00000490514 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
TCTN1-215ENST00000490514 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
TCTN1-215ENST00000490514 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
TCTN1-215ENST00000490514 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
TCTN1-215ENST00000490514 MT4P47944 62 aa5.08□□□□□ -1.6
TCTN1-215ENST00000490514 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
TCTN1-215ENST00000490514 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
TCTN1-215ENST00000490514 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
TCTN1-215ENST00000490514 INE1O15225 51 aa4.99□□□□□ -1.61
TCTN1-215ENST00000490514 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.61
TCTN1-215ENST00000490514 MT3P25713 68 aa4.9□□□□□ -1.62
TCTN1-215ENST00000490514 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
TCTN1-215ENST00000490514 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
TCTN1-215ENST00000490514 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
TCTN1-215ENST00000490514 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
TCTN1-215ENST00000490514 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
TCTN1-215ENST00000490514 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
TCTN1-215ENST00000490514 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
TCTN1-215ENST00000490514 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
TCTN1-215ENST00000490514 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
TCTN1-215ENST00000490514 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
TCTN1-215ENST00000490514 PRM1P04553 51 aa4.13□□□□□ -1.75
TCTN1-215ENST00000490514 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TCTN1-215ENST00000490514 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
TCTN1-215ENST00000490514 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
TCTN1-215ENST00000490514 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
TCTN1-215ENST00000490514 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
TCTN1-215ENST00000490514 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
TCTN1-215ENST00000490514 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
TCTN1-215ENST00000490514 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
TCTN1-215ENST00000490514 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
TCTN1-215ENST00000490514 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
TCTN1-215ENST00000490514 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TCTN1-215ENST00000490514 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
TCTN1-215ENST00000490514 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
TCTN1-215ENST00000490514 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
TCTN1-215ENST00000490514 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 34.5 ms