RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CRNKL1-203ENST00000490258 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
CRNKL1-203ENST00000490258 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CRNKL1-203ENST00000490258 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 S4R3F8 94 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 MUC17Q685J3 4493 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
CRNKL1-203ENST00000490258 LRP2P98164 4655 aa1.69□□□□□ -2.14
CRNKL1-203ENST00000490258 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CRNKL1-203ENST00000490258 A0A0D9SG42 100 aa1.67□□□□□ -2.14
CRNKL1-203ENST00000490258 M0QZ58 72 aa1.66□□□□□ -2.14
CRNKL1-203ENST00000490258 R4GN34 69 aa1.64□□□□□ -2.15
CRNKL1-203ENST00000490258 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
CRNKL1-203ENST00000490258 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
CRNKL1-203ENST00000490258 NEBP20929 6669 aa1.61□□□□□ -2.15
CRNKL1-203ENST00000490258 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CRNKL1-203ENST00000490258 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PP632Q6XCG6 107 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PLAC4Q8WY50 150 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 SPRR5A0A1B0GTR4 108 aa1.57□□□□□ -2.16
CRNKL1-203ENST00000490258 MT1HP80294 61 aa1.53□□□□□ -2.16
CRNKL1-203ENST00000490258 MT1FP04733 61 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 USH2AO75445 5202 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 M0R2T5 61 aa1.48□□□□□ -2.17
CRNKL1-203ENST00000490258 MT2AP02795 61 aa1.48□□□□□ -2.17
CRNKL1-203ENST00000490258 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
CRNKL1-203ENST00000490258 TNP1P09430 55 aa1.46□□□□□ -2.18
CRNKL1-203ENST00000490258 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
CRNKL1-203ENST00000490258 INE1O15225 51 aa1.44□□□□□ -2.18
CRNKL1-203ENST00000490258 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
CRNKL1-203ENST00000490258 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
CRNKL1-203ENST00000490258 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CRNKL1-203ENST00000490258 MT1BP07438 61 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 SPRR2GQ9BYE4 73 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP19-8Q3LI54 63 aa1.33□□□□□ -2.2
CRNKL1-203ENST00000490258 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
CRNKL1-203ENST00000490258 MT1XP80297 61 aa1.32□□□□□ -2.2
CRNKL1-203ENST00000490258 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
CRNKL1-203ENST00000490258 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
CRNKL1-203ENST00000490258 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
CRNKL1-203ENST00000490258 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
CRNKL1-203ENST00000490258 KRTAP19-6Q3LI70 58 aa1.23□□□□□ -2.21
CRNKL1-203ENST00000490258 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
CRNKL1-203ENST00000490258 SPRR2FQ96RM1 72 aa1.17□□□□□ -2.22
CRNKL1-203ENST00000490258 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
CRNKL1-203ENST00000490258 MT1EP04732 61 aa1.14□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2EP22531 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2BP35325 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2AP35326 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1LQ93083 61 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2DP22532 72 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1MQ8N339 61 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1GP13640 62 aa1.08□□□□□ -2.24
CRNKL1-203ENST00000490258 KRTAP12-4P60329 112 aa1.08□□□□□ -2.24
CRNKL1-203ENST00000490258 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CRNKL1-203ENST00000490258 MT1AP04731 61 aa1.03□□□□□ -2.24
CRNKL1-203ENST00000490258 MT4P47944 62 aa1□□□□□ -2.25
CRNKL1-203ENST00000490258 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
CRNKL1-203ENST00000490258 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
CRNKL1-203ENST00000490258 PRM1P04553 51 aa0.95□□□□□ -2.26
CRNKL1-203ENST00000490258 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
CRNKL1-203ENST00000490258 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
CRNKL1-203ENST00000490258 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
CRNKL1-203ENST00000490258 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
CRNKL1-203ENST00000490258 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms