RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CRNKL1-203ENST00000490258 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
CRNKL1-203ENST00000490258 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CRNKL1-203ENST00000490258 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 S4R3F8 94 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 MUC17Q685J3 4493 aa1.7□□□□□ -2.14
CRNKL1-203ENST00000490258 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
CRNKL1-203ENST00000490258 LRP2P98164 4655 aa1.69□□□□□ -2.14
CRNKL1-203ENST00000490258 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CRNKL1-203ENST00000490258 A0A0D9SG42 100 aa1.67□□□□□ -2.14
CRNKL1-203ENST00000490258 M0QZ58 72 aa1.66□□□□□ -2.14
CRNKL1-203ENST00000490258 R4GN34 69 aa1.64□□□□□ -2.15
CRNKL1-203ENST00000490258 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
CRNKL1-203ENST00000490258 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
CRNKL1-203ENST00000490258 NEBP20929 6669 aa1.61□□□□□ -2.15
CRNKL1-203ENST00000490258 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CRNKL1-203ENST00000490258 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PP632Q6XCG6 107 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PLAC4Q8WY50 150 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
CRNKL1-203ENST00000490258 SPRR5A0A1B0GTR4 108 aa1.57□□□□□ -2.16
CRNKL1-203ENST00000490258 MT1HP80294 61 aa1.53□□□□□ -2.16
CRNKL1-203ENST00000490258 MT1FP04733 61 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 USH2AO75445 5202 aa1.49□□□□□ -2.17
CRNKL1-203ENST00000490258 M0R2T5 61 aa1.48□□□□□ -2.17
CRNKL1-203ENST00000490258 MT2AP02795 61 aa1.48□□□□□ -2.17
CRNKL1-203ENST00000490258 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
CRNKL1-203ENST00000490258 TNP1P09430 55 aa1.46□□□□□ -2.18
CRNKL1-203ENST00000490258 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
CRNKL1-203ENST00000490258 INE1O15225 51 aa1.44□□□□□ -2.18
CRNKL1-203ENST00000490258 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
CRNKL1-203ENST00000490258 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
CRNKL1-203ENST00000490258 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CRNKL1-203ENST00000490258 MT1BP07438 61 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 SPRR2GQ9BYE4 73 aa1.39□□□□□ -2.19
CRNKL1-203ENST00000490258 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
CRNKL1-203ENST00000490258 KRTAP19-8Q3LI54 63 aa1.33□□□□□ -2.2
CRNKL1-203ENST00000490258 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
CRNKL1-203ENST00000490258 MT1XP80297 61 aa1.32□□□□□ -2.2
CRNKL1-203ENST00000490258 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
CRNKL1-203ENST00000490258 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
CRNKL1-203ENST00000490258 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
CRNKL1-203ENST00000490258 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
CRNKL1-203ENST00000490258 KRTAP19-6Q3LI70 58 aa1.23□□□□□ -2.21
CRNKL1-203ENST00000490258 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CRNKL1-203ENST00000490258 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
CRNKL1-203ENST00000490258 SPRR2FQ96RM1 72 aa1.17□□□□□ -2.22
CRNKL1-203ENST00000490258 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
CRNKL1-203ENST00000490258 MT1EP04732 61 aa1.14□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2EP22531 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2BP35325 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2AP35326 72 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1LQ93083 61 aa1.13□□□□□ -2.23
CRNKL1-203ENST00000490258 SPRR2DP22532 72 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1MQ8N339 61 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CRNKL1-203ENST00000490258 MT1GP13640 62 aa1.08□□□□□ -2.24
CRNKL1-203ENST00000490258 KRTAP12-4P60329 112 aa1.08□□□□□ -2.24
CRNKL1-203ENST00000490258 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CRNKL1-203ENST00000490258 MT1AP04731 61 aa1.03□□□□□ -2.24
CRNKL1-203ENST00000490258 MT4P47944 62 aa1□□□□□ -2.25
CRNKL1-203ENST00000490258 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
CRNKL1-203ENST00000490258 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
CRNKL1-203ENST00000490258 PRM1P04553 51 aa0.95□□□□□ -2.26
CRNKL1-203ENST00000490258 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
CRNKL1-203ENST00000490258 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
CRNKL1-203ENST00000490258 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
CRNKL1-203ENST00000490258 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
CRNKL1-203ENST00000490258 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 55.3 ms