RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
TSC2-215ENST00000490108 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
TSC2-215ENST00000490108 TNP1P09430 55 aa6.98□□□□□ -1.29
TSC2-215ENST00000490108 AHNAK2Q8IVF2 5795 aa6.96□□□□□ -1.3
TSC2-215ENST00000490108 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
TSC2-215ENST00000490108 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
TSC2-215ENST00000490108 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
TSC2-215ENST00000490108 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
TSC2-215ENST00000490108 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
TSC2-215ENST00000490108 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
TSC2-215ENST00000490108 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
TSC2-215ENST00000490108 UQCR11O14957 56 aa6.72□□□□□ -1.33
TSC2-215ENST00000490108 V9GYY9 64 aa6.64□□□□□ -1.35
TSC2-215ENST00000490108 Q1T7F1 81 aa6.6□□□□□ -1.35
TSC2-215ENST00000490108 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
TSC2-215ENST00000490108 PSPHP1O15172 72 aa6.55□□□□□ -1.36
TSC2-215ENST00000490108 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
TSC2-215ENST00000490108 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
TSC2-215ENST00000490108 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
TSC2-215ENST00000490108 KRTAP5-7Q6L8G8 165 aa6.49□□□□□ -1.37
TSC2-215ENST00000490108 PCP4P48539 62 aa6.48□□□□□ -1.37
TSC2-215ENST00000490108 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
TSC2-215ENST00000490108 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.38
TSC2-215ENST00000490108 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
TSC2-215ENST00000490108 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
TSC2-215ENST00000490108 K7ERS5 55 aa6.42□□□□□ -1.38
TSC2-215ENST00000490108 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
TSC2-215ENST00000490108 A6NED7 52 aa6.34□□□□□ -1.39
TSC2-215ENST00000490108 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
TSC2-215ENST00000490108 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
TSC2-215ENST00000490108 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TSC2-215ENST00000490108 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
TSC2-215ENST00000490108 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
TSC2-215ENST00000490108 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
TSC2-215ENST00000490108 MT1AP04731 61 aa6.04□□□□□ -1.44
TSC2-215ENST00000490108 ROMO1P60602 79 aa6.03□□□□□ -1.44
TSC2-215ENST00000490108 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
TSC2-215ENST00000490108 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
TSC2-215ENST00000490108 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
TSC2-215ENST00000490108 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
TSC2-215ENST00000490108 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
TSC2-215ENST00000490108 KRTAP5-8O75690 187 aa5.81□□□□□ -1.48
TSC2-215ENST00000490108 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
TSC2-215ENST00000490108 AHNAKQ09666 5890 aaKnown RBP5.78□□□□□ -1.48
TSC2-215ENST00000490108 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
TSC2-215ENST00000490108 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
TSC2-215ENST00000490108 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
TSC2-215ENST00000490108 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
TSC2-215ENST00000490108 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
TSC2-215ENST00000490108 MT3P25713 68 aa5.52□□□□□ -1.53
TSC2-215ENST00000490108 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
TSC2-215ENST00000490108 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
TSC2-215ENST00000490108 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
TSC2-215ENST00000490108 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
TSC2-215ENST00000490108 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
TSC2-215ENST00000490108 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
TSC2-215ENST00000490108 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
TSC2-215ENST00000490108 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
TSC2-215ENST00000490108 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
TSC2-215ENST00000490108 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
TSC2-215ENST00000490108 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
TSC2-215ENST00000490108 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
TSC2-215ENST00000490108 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
TSC2-215ENST00000490108 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
TSC2-215ENST00000490108 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
TSC2-215ENST00000490108 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
TSC2-215ENST00000490108 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
TSC2-215ENST00000490108 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
TSC2-215ENST00000490108 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
TSC2-215ENST00000490108 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
TSC2-215ENST00000490108 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
TSC2-215ENST00000490108 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
TSC2-215ENST00000490108 PRM1P04553 51 aa3.08□□□□□ -1.92
TSC2-215ENST00000490108 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
TSC2-215ENST00000490108 INE1O15225 51 aa2.91□□□□□ -1.94
TSC2-215ENST00000490108 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
TSC2-215ENST00000490108 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
TSC2-215ENST00000490108 H3BS24 57 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 146.1 ms