RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-209ENST00000489861 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
COL9A1-209ENST00000489861 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
COL9A1-209ENST00000489861 COA5Q86WW8 74 aa2.75□□□□□ -1.97
COL9A1-209ENST00000489861 COX7CP15954 63 aa2.73□□□□□ -1.97
COL9A1-209ENST00000489861 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
COL9A1-209ENST00000489861 MT1EP04732 61 aa2.71□□□□□ -1.98
COL9A1-209ENST00000489861 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
COL9A1-209ENST00000489861 A0A1B0GU33 70 aa2.69□□□□□ -1.98
COL9A1-209ENST00000489861 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
COL9A1-209ENST00000489861 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
COL9A1-209ENST00000489861 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
COL9A1-209ENST00000489861 A0A0D9SG42 100 aa2.67□□□□□ -1.98
COL9A1-209ENST00000489861 A0A1B0GU69 56 aa2.67□□□□□ -1.98
COL9A1-209ENST00000489861 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
COL9A1-209ENST00000489861 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
COL9A1-209ENST00000489861 H7BZZ5 65 aa2.66□□□□□ -1.98
COL9A1-209ENST00000489861 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
COL9A1-209ENST00000489861 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
COL9A1-209ENST00000489861 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
COL9A1-209ENST00000489861 MT1GP13640 62 aa2.64□□□□□ -1.99
COL9A1-209ENST00000489861 ATP5EP56381 51 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-209ENST00000489861 SPATA8Q6RVD6 105 aa2.63□□□□□ -1.99
COL9A1-209ENST00000489861 ANAPC13Q9BS18 74 aa2.63□□□□□ -1.99
COL9A1-209ENST00000489861 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
COL9A1-209ENST00000489861 MT1MQ8N339 61 aa2.62□□□□□ -1.99
COL9A1-209ENST00000489861 V9GYY9 64 aa2.61□□□□□ -1.99
COL9A1-209ENST00000489861 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
COL9A1-209ENST00000489861 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
COL9A1-209ENST00000489861 TNP1P09430 55 aa2.57□□□□□ -2
COL9A1-209ENST00000489861 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
COL9A1-209ENST00000489861 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
COL9A1-209ENST00000489861 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
COL9A1-209ENST00000489861 LINC01558Q9Y6Z2 57 aa2.52□□□□□ -2.01
COL9A1-209ENST00000489861 A8MU10 97 aa2.51□□□□□ -2.01
COL9A1-209ENST00000489861 UQCR11O14957 56 aa2.51□□□□□ -2.01
COL9A1-209ENST00000489861 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
COL9A1-209ENST00000489861 TMEM258P61165 79 aa2.5□□□□□ -2.01
COL9A1-209ENST00000489861 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
COL9A1-209ENST00000489861 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
COL9A1-209ENST00000489861 K7ERS5 55 aa2.49□□□□□ -2.01
COL9A1-209ENST00000489861 MT1LQ93083 61 aa2.49□□□□□ -2.01
COL9A1-209ENST00000489861 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
COL9A1-209ENST00000489861 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
COL9A1-209ENST00000489861 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
COL9A1-209ENST00000489861 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
COL9A1-209ENST00000489861 MIR22HGQ0VDD5 57 aa2.43□□□□□ -2.02
COL9A1-209ENST00000489861 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
COL9A1-209ENST00000489861 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
COL9A1-209ENST00000489861 PSPHP1O15172 72 aa2.4□□□□□ -2.03
COL9A1-209ENST00000489861 MT3P25713 68 aa2.38□□□□□ -2.03
COL9A1-209ENST00000489861 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
COL9A1-209ENST00000489861 PRO0628Q9UI54 55 aa2.35□□□□□ -2.03
COL9A1-209ENST00000489861 Q1T7F1 81 aa2.34□□□□□ -2.03
COL9A1-209ENST00000489861 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
COL9A1-209ENST00000489861 A6NED7 52 aa2.29□□□□□ -2.04
COL9A1-209ENST00000489861 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
COL9A1-209ENST00000489861 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
COL9A1-209ENST00000489861 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
COL9A1-209ENST00000489861 ROMO1P60602 79 aa2.22□□□□□ -2.05
COL9A1-209ENST00000489861 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
COL9A1-209ENST00000489861 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
COL9A1-209ENST00000489861 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
COL9A1-209ENST00000489861 MT1AP04731 61 aa2.14□□□□□ -2.07
COL9A1-209ENST00000489861 PMAIP1Q13794 54 aa2.09□□□□□ -2.07
COL9A1-209ENST00000489861 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
COL9A1-209ENST00000489861 BRK1Q8WUW1 75 aa1.92□□□□□ -2.1
COL9A1-209ENST00000489861 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
COL9A1-209ENST00000489861 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
COL9A1-209ENST00000489861 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
COL9A1-209ENST00000489861 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
COL9A1-209ENST00000489861 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
COL9A1-209ENST00000489861 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
COL9A1-209ENST00000489861 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
COL9A1-209ENST00000489861 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
COL9A1-209ENST00000489861 INE1O15225 51 aa1.38□□□□□ -2.19
COL9A1-209ENST00000489861 PRM1P04553 51 aa1.09□□□□□ -2.23
COL9A1-209ENST00000489861 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 59.9 ms