RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
RAB3GAP1-205ENST00000489858 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
RAB3GAP1-205ENST00000489858 MT1FP04733 61 aa4.08□□□□□ -1.76
RAB3GAP1-205ENST00000489858 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
RAB3GAP1-205ENST00000489858 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
RAB3GAP1-205ENST00000489858 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
RAB3GAP1-205ENST00000489858 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
RAB3GAP1-205ENST00000489858 MT1BP07438 61 aa3.93□□□□□ -1.78
RAB3GAP1-205ENST00000489858 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
RAB3GAP1-205ENST00000489858 MT1XP80297 61 aa3.86□□□□□ -1.79
RAB3GAP1-205ENST00000489858 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
RAB3GAP1-205ENST00000489858 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
RAB3GAP1-205ENST00000489858 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
RAB3GAP1-205ENST00000489858 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
RAB3GAP1-205ENST00000489858 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
RAB3GAP1-205ENST00000489858 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
RAB3GAP1-205ENST00000489858 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
RAB3GAP1-205ENST00000489858 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
RAB3GAP1-205ENST00000489858 USH2AO75445 5202 aa3.6□□□□□ -1.83
RAB3GAP1-205ENST00000489858 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
RAB3GAP1-205ENST00000489858 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
RAB3GAP1-205ENST00000489858 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
RAB3GAP1-205ENST00000489858 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
RAB3GAP1-205ENST00000489858 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
RAB3GAP1-205ENST00000489858 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
RAB3GAP1-205ENST00000489858 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
RAB3GAP1-205ENST00000489858 MT1EP04732 61 aa3.38□□□□□ -1.87
RAB3GAP1-205ENST00000489858 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
RAB3GAP1-205ENST00000489858 KMT2DO14686 5537 aa3.36□□□□□ -1.87
RAB3GAP1-205ENST00000489858 MT1LQ93083 61 aa3.35□□□□□ -1.87
RAB3GAP1-205ENST00000489858 INE1O15225 51 aa3.3□□□□□ -1.88
RAB3GAP1-205ENST00000489858 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
RAB3GAP1-205ENST00000489858 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
RAB3GAP1-205ENST00000489858 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
RAB3GAP1-205ENST00000489858 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
RAB3GAP1-205ENST00000489858 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
RAB3GAP1-205ENST00000489858 MT1GP13640 62 aa3.17□□□□□ -1.9
RAB3GAP1-205ENST00000489858 MT1MQ8N339 61 aa3.17□□□□□ -1.9
RAB3GAP1-205ENST00000489858 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
RAB3GAP1-205ENST00000489858 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
RAB3GAP1-205ENST00000489858 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
RAB3GAP1-205ENST00000489858 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
RAB3GAP1-205ENST00000489858 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
RAB3GAP1-205ENST00000489858 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
RAB3GAP1-205ENST00000489858 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
RAB3GAP1-205ENST00000489858 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
RAB3GAP1-205ENST00000489858 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
RAB3GAP1-205ENST00000489858 SPRR2EP22531 72 aa2.89□□□□□ -1.95
RAB3GAP1-205ENST00000489858 SPRR2BP35325 72 aa2.89□□□□□ -1.95
RAB3GAP1-205ENST00000489858 SPRR2AP35326 72 aa2.89□□□□□ -1.95
RAB3GAP1-205ENST00000489858 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
RAB3GAP1-205ENST00000489858 NEBP20929 6669 aa2.86□□□□□ -1.95
RAB3GAP1-205ENST00000489858 MT1AP04731 61 aa2.86□□□□□ -1.95
RAB3GAP1-205ENST00000489858 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
RAB3GAP1-205ENST00000489858 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
RAB3GAP1-205ENST00000489858 SPRR2DP22532 72 aa2.78□□□□□ -1.96
RAB3GAP1-205ENST00000489858 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
RAB3GAP1-205ENST00000489858 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
RAB3GAP1-205ENST00000489858 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
RAB3GAP1-205ENST00000489858 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
RAB3GAP1-205ENST00000489858 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
RAB3GAP1-205ENST00000489858 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
RAB3GAP1-205ENST00000489858 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
RAB3GAP1-205ENST00000489858 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
RAB3GAP1-205ENST00000489858 PRM1P04553 51 aa2.43□□□□□ -2.02
RAB3GAP1-205ENST00000489858 MT4P47944 62 aa2.39□□□□□ -2.03
RAB3GAP1-205ENST00000489858 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
RAB3GAP1-205ENST00000489858 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
RAB3GAP1-205ENST00000489858 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
RAB3GAP1-205ENST00000489858 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
RAB3GAP1-205ENST00000489858 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
RAB3GAP1-205ENST00000489858 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
RAB3GAP1-205ENST00000489858 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
RAB3GAP1-205ENST00000489858 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
RAB3GAP1-205ENST00000489858 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
RAB3GAP1-205ENST00000489858 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
RAB3GAP1-205ENST00000489858 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
RAB3GAP1-205ENST00000489858 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 39.7 ms