RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 PSPHP1O15172 72 aa6.83□□□□□ -1.32
EPHB4-207ENST00000489808 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
EPHB4-207ENST00000489808 MT1LQ93083 61 aa6.82□□□□□ -1.32
EPHB4-207ENST00000489808 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
EPHB4-207ENST00000489808 MT1MQ8N339 61 aa6.75□□□□□ -1.33
EPHB4-207ENST00000489808 K7ERS5 55 aa6.73□□□□□ -1.33
EPHB4-207ENST00000489808 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
EPHB4-207ENST00000489808 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
EPHB4-207ENST00000489808 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
EPHB4-207ENST00000489808 A6NED7 52 aa6.59□□□□□ -1.35
EPHB4-207ENST00000489808 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
EPHB4-207ENST00000489808 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
EPHB4-207ENST00000489808 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
EPHB4-207ENST00000489808 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
EPHB4-207ENST00000489808 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
EPHB4-207ENST00000489808 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
EPHB4-207ENST00000489808 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
EPHB4-207ENST00000489808 MT4P47944 62 aa6.36□□□□□ -1.39
EPHB4-207ENST00000489808 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.4
EPHB4-207ENST00000489808 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
EPHB4-207ENST00000489808 ROMO1P60602 79 aa6.32□□□□□ -1.4
EPHB4-207ENST00000489808 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
EPHB4-207ENST00000489808 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
EPHB4-207ENST00000489808 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
EPHB4-207ENST00000489808 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
EPHB4-207ENST00000489808 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
EPHB4-207ENST00000489808 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
EPHB4-207ENST00000489808 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
EPHB4-207ENST00000489808 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
EPHB4-207ENST00000489808 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
EPHB4-207ENST00000489808 AHNAK2Q8IVF2 5795 aa6.08□□□□□ -1.44
EPHB4-207ENST00000489808 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
EPHB4-207ENST00000489808 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
EPHB4-207ENST00000489808 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
EPHB4-207ENST00000489808 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
EPHB4-207ENST00000489808 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
EPHB4-207ENST00000489808 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
EPHB4-207ENST00000489808 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
EPHB4-207ENST00000489808 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
EPHB4-207ENST00000489808 MT1AP04731 61 aa5.79□□□□□ -1.48
EPHB4-207ENST00000489808 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
EPHB4-207ENST00000489808 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
EPHB4-207ENST00000489808 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
EPHB4-207ENST00000489808 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
EPHB4-207ENST00000489808 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
EPHB4-207ENST00000489808 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
EPHB4-207ENST00000489808 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
EPHB4-207ENST00000489808 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
EPHB4-207ENST00000489808 MT3P25713 68 aa5.32□□□□□ -1.56
EPHB4-207ENST00000489808 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
EPHB4-207ENST00000489808 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
EPHB4-207ENST00000489808 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
EPHB4-207ENST00000489808 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
EPHB4-207ENST00000489808 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
EPHB4-207ENST00000489808 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
EPHB4-207ENST00000489808 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
EPHB4-207ENST00000489808 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
EPHB4-207ENST00000489808 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
EPHB4-207ENST00000489808 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
EPHB4-207ENST00000489808 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
EPHB4-207ENST00000489808 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
EPHB4-207ENST00000489808 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
EPHB4-207ENST00000489808 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
EPHB4-207ENST00000489808 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
EPHB4-207ENST00000489808 H3BS24 57 aa4.2□□□□□ -1.74
EPHB4-207ENST00000489808 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
EPHB4-207ENST00000489808 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
EPHB4-207ENST00000489808 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
EPHB4-207ENST00000489808 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
EPHB4-207ENST00000489808 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
EPHB4-207ENST00000489808 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
EPHB4-207ENST00000489808 INE1O15225 51 aa3.7□□□□□ -1.82
EPHB4-207ENST00000489808 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
EPHB4-207ENST00000489808 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
EPHB4-207ENST00000489808 PRM1P04553 51 aa3.23□□□□□ -1.89
EPHB4-207ENST00000489808 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
EPHB4-207ENST00000489808 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
EPHB4-207ENST00000489808 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 70.1 ms