RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SERPINA1-210ENST00000489769 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
SERPINA1-210ENST00000489769 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
SERPINA1-210ENST00000489769 NEBP20929 6669 aa4.33□□□□□ -1.72
SERPINA1-210ENST00000489769 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
SERPINA1-210ENST00000489769 SPRR2EP22531 72 aa4.31□□□□□ -1.72
SERPINA1-210ENST00000489769 SPRR2BP35325 72 aa4.31□□□□□ -1.72
SERPINA1-210ENST00000489769 SPRR2AP35326 72 aa4.31□□□□□ -1.72
SERPINA1-210ENST00000489769 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
SERPINA1-210ENST00000489769 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
SERPINA1-210ENST00000489769 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
SERPINA1-210ENST00000489769 MT1EP04732 61 aa4.21□□□□□ -1.74
SERPINA1-210ENST00000489769 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
SERPINA1-210ENST00000489769 INE1O15225 51 aa4.15□□□□□ -1.74
SERPINA1-210ENST00000489769 SPRR2DP22532 72 aa4.15□□□□□ -1.74
SERPINA1-210ENST00000489769 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
SERPINA1-210ENST00000489769 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
SERPINA1-210ENST00000489769 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
SERPINA1-210ENST00000489769 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
SERPINA1-210ENST00000489769 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
SERPINA1-210ENST00000489769 MT1LQ93083 61 aa4.07□□□□□ -1.76
SERPINA1-210ENST00000489769 MT1GP13640 62 aa4.04□□□□□ -1.76
SERPINA1-210ENST00000489769 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
SERPINA1-210ENST00000489769 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
SERPINA1-210ENST00000489769 MT1MQ8N339 61 aa3.99□□□□□ -1.77
SERPINA1-210ENST00000489769 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SERPINA1-210ENST00000489769 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
SERPINA1-210ENST00000489769 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
SERPINA1-210ENST00000489769 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
SERPINA1-210ENST00000489769 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
SERPINA1-210ENST00000489769 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
SERPINA1-210ENST00000489769 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SERPINA1-210ENST00000489769 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
SERPINA1-210ENST00000489769 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
SERPINA1-210ENST00000489769 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SERPINA1-210ENST00000489769 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SERPINA1-210ENST00000489769 MT4P47944 62 aa3.64□□□□□ -1.83
SERPINA1-210ENST00000489769 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
SERPINA1-210ENST00000489769 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
SERPINA1-210ENST00000489769 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
SERPINA1-210ENST00000489769 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SERPINA1-210ENST00000489769 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
SERPINA1-210ENST00000489769 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
SERPINA1-210ENST00000489769 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
SERPINA1-210ENST00000489769 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
SERPINA1-210ENST00000489769 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SERPINA1-210ENST00000489769 MT1AP04731 61 aa3.45□□□□□ -1.86
SERPINA1-210ENST00000489769 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SERPINA1-210ENST00000489769 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
SERPINA1-210ENST00000489769 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
SERPINA1-210ENST00000489769 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
SERPINA1-210ENST00000489769 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
SERPINA1-210ENST00000489769 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
SERPINA1-210ENST00000489769 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SERPINA1-210ENST00000489769 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
SERPINA1-210ENST00000489769 MT3P25713 68 aa3.14□□□□□ -1.91
SERPINA1-210ENST00000489769 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SERPINA1-210ENST00000489769 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SERPINA1-210ENST00000489769 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
SERPINA1-210ENST00000489769 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SERPINA1-210ENST00000489769 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SERPINA1-210ENST00000489769 PRM1P04553 51 aa2.87□□□□□ -1.95
SERPINA1-210ENST00000489769 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SERPINA1-210ENST00000489769 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SERPINA1-210ENST00000489769 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SERPINA1-210ENST00000489769 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
SERPINA1-210ENST00000489769 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
SERPINA1-210ENST00000489769 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
SERPINA1-210ENST00000489769 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SERPINA1-210ENST00000489769 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SERPINA1-210ENST00000489769 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
SERPINA1-210ENST00000489769 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SERPINA1-210ENST00000489769 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SERPINA1-210ENST00000489769 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
SERPINA1-210ENST00000489769 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SERPINA1-210ENST00000489769 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SERPINA1-210ENST00000489769 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
SERPINA1-210ENST00000489769 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms