RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
NOD1-208ENST00000489614 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
NOD1-208ENST00000489614 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
NOD1-208ENST00000489614 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
NOD1-208ENST00000489614 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
NOD1-208ENST00000489614 MT1EP04732 61 aa3.47□□□□□ -1.85
NOD1-208ENST00000489614 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
NOD1-208ENST00000489614 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
NOD1-208ENST00000489614 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
NOD1-208ENST00000489614 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
NOD1-208ENST00000489614 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
NOD1-208ENST00000489614 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
NOD1-208ENST00000489614 MT1LQ93083 61 aa3.4□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
NOD1-208ENST00000489614 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
NOD1-208ENST00000489614 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
NOD1-208ENST00000489614 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
NOD1-208ENST00000489614 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
NOD1-208ENST00000489614 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.89
NOD1-208ENST00000489614 MT1GP13640 62 aa3.27□□□□□ -1.89
NOD1-208ENST00000489614 MT1MQ8N339 61 aa3.26□□□□□ -1.89
NOD1-208ENST00000489614 SPRR2EP22531 72 aa3.25□□□□□ -1.89
NOD1-208ENST00000489614 SPRR2BP35325 72 aa3.25□□□□□ -1.89
NOD1-208ENST00000489614 SPRR2AP35326 72 aa3.25□□□□□ -1.89
NOD1-208ENST00000489614 NEBP20929 6669 aa3.19□□□□□ -1.9
NOD1-208ENST00000489614 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
NOD1-208ENST00000489614 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
NOD1-208ENST00000489614 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
NOD1-208ENST00000489614 SPRR2DP22532 72 aa3.11□□□□□ -1.91
NOD1-208ENST00000489614 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
NOD1-208ENST00000489614 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
NOD1-208ENST00000489614 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
NOD1-208ENST00000489614 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
NOD1-208ENST00000489614 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
NOD1-208ENST00000489614 PRM1P04553 51 aa3□□□□□ -1.93
NOD1-208ENST00000489614 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
NOD1-208ENST00000489614 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
NOD1-208ENST00000489614 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
NOD1-208ENST00000489614 LCE1EQ5T753 118 aa2.96□□□□□ -1.93
NOD1-208ENST00000489614 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
NOD1-208ENST00000489614 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
NOD1-208ENST00000489614 MT1AP04731 61 aa2.89□□□□□ -1.95
NOD1-208ENST00000489614 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
NOD1-208ENST00000489614 MT4P47944 62 aa2.87□□□□□ -1.95
NOD1-208ENST00000489614 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
NOD1-208ENST00000489614 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
NOD1-208ENST00000489614 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
NOD1-208ENST00000489614 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
NOD1-208ENST00000489614 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
NOD1-208ENST00000489614 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
NOD1-208ENST00000489614 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
NOD1-208ENST00000489614 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
NOD1-208ENST00000489614 MT3P25713 68 aa2.55□□□□□ -2
NOD1-208ENST00000489614 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
NOD1-208ENST00000489614 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2.01
NOD1-208ENST00000489614 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
NOD1-208ENST00000489614 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
NOD1-208ENST00000489614 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
NOD1-208ENST00000489614 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
NOD1-208ENST00000489614 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
NOD1-208ENST00000489614 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
NOD1-208ENST00000489614 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
NOD1-208ENST00000489614 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
NOD1-208ENST00000489614 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
NOD1-208ENST00000489614 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
NOD1-208ENST00000489614 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
NOD1-208ENST00000489614 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
NOD1-208ENST00000489614 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
NOD1-208ENST00000489614 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
NOD1-208ENST00000489614 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
NOD1-208ENST00000489614 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
NOD1-208ENST00000489614 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
NOD1-208ENST00000489614 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
NOD1-208ENST00000489614 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 41 ms