RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 TMEM258P61165 79 aa5.1□□□□□ -1.59
LMO4-203ENST00000489303 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
LMO4-203ENST00000489303 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
LMO4-203ENST00000489303 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
LMO4-203ENST00000489303 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
LMO4-203ENST00000489303 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
LMO4-203ENST00000489303 MT1EP04732 61 aa5.01□□□□□ -1.61
LMO4-203ENST00000489303 TNP1P09430 55 aa4.99□□□□□ -1.61
LMO4-203ENST00000489303 UQCR11O14957 56 aa4.98□□□□□ -1.61
LMO4-203ENST00000489303 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
LMO4-203ENST00000489303 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
LMO4-203ENST00000489303 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
LMO4-203ENST00000489303 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
LMO4-203ENST00000489303 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
LMO4-203ENST00000489303 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
LMO4-203ENST00000489303 MT1GP13640 62 aa4.88□□□□□ -1.63
LMO4-203ENST00000489303 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
LMO4-203ENST00000489303 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
LMO4-203ENST00000489303 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
LMO4-203ENST00000489303 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
LMO4-203ENST00000489303 K7ERS5 55 aa4.83□□□□□ -1.64
LMO4-203ENST00000489303 PSPHP1O15172 72 aa4.83□□□□□ -1.64
LMO4-203ENST00000489303 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
LMO4-203ENST00000489303 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
LMO4-203ENST00000489303 MT1LQ93083 61 aa4.8□□□□□ -1.64
LMO4-203ENST00000489303 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
LMO4-203ENST00000489303 Q1T7F1 81 aa4.77□□□□□ -1.65
LMO4-203ENST00000489303 MT1MQ8N339 61 aa4.77□□□□□ -1.65
LMO4-203ENST00000489303 MT4P47944 62 aa4.75□□□□□ -1.65
LMO4-203ENST00000489303 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
LMO4-203ENST00000489303 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
LMO4-203ENST00000489303 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
LMO4-203ENST00000489303 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
LMO4-203ENST00000489303 A6NED7 52 aa4.66□□□□□ -1.66
LMO4-203ENST00000489303 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
LMO4-203ENST00000489303 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
LMO4-203ENST00000489303 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
LMO4-203ENST00000489303 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
LMO4-203ENST00000489303 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
LMO4-203ENST00000489303 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
LMO4-203ENST00000489303 ROMO1P60602 79 aa4.45□□□□□ -1.7
LMO4-203ENST00000489303 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
LMO4-203ENST00000489303 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
LMO4-203ENST00000489303 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
LMO4-203ENST00000489303 MT3P25713 68 aa4.34□□□□□ -1.71
LMO4-203ENST00000489303 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
LMO4-203ENST00000489303 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
LMO4-203ENST00000489303 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
LMO4-203ENST00000489303 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
LMO4-203ENST00000489303 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
LMO4-203ENST00000489303 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
LMO4-203ENST00000489303 MT1AP04731 61 aa4.1□□□□□ -1.75
LMO4-203ENST00000489303 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
LMO4-203ENST00000489303 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
LMO4-203ENST00000489303 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
LMO4-203ENST00000489303 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
LMO4-203ENST00000489303 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
LMO4-203ENST00000489303 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
LMO4-203ENST00000489303 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
LMO4-203ENST00000489303 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
LMO4-203ENST00000489303 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
LMO4-203ENST00000489303 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
LMO4-203ENST00000489303 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
LMO4-203ENST00000489303 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
LMO4-203ENST00000489303 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
LMO4-203ENST00000489303 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
LMO4-203ENST00000489303 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
LMO4-203ENST00000489303 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
LMO4-203ENST00000489303 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
LMO4-203ENST00000489303 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
LMO4-203ENST00000489303 INE1O15225 51 aa3.05□□□□□ -1.92
LMO4-203ENST00000489303 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
LMO4-203ENST00000489303 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
LMO4-203ENST00000489303 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
LMO4-203ENST00000489303 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
LMO4-203ENST00000489303 PRM1P04553 51 aa2.26□□□□□ -2.05
LMO4-203ENST00000489303 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
LMO4-203ENST00000489303 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms