RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
SRRM1-216ENST00000489130 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
SRRM1-216ENST00000489130 MT1LQ93083 61 aa4.48□□□□□ -1.69
SRRM1-216ENST00000489130 MT1MQ8N339 61 aa4.46□□□□□ -1.7
SRRM1-216ENST00000489130 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
SRRM1-216ENST00000489130 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
SRRM1-216ENST00000489130 TNP1P09430 55 aa4.45□□□□□ -1.7
SRRM1-216ENST00000489130 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
SRRM1-216ENST00000489130 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
SRRM1-216ENST00000489130 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
SRRM1-216ENST00000489130 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
SRRM1-216ENST00000489130 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
SRRM1-216ENST00000489130 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
SRRM1-216ENST00000489130 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
SRRM1-216ENST00000489130 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
SRRM1-216ENST00000489130 MT4P47944 62 aa4.32□□□□□ -1.72
SRRM1-216ENST00000489130 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
SRRM1-216ENST00000489130 UQCR11O14957 56 aa4.29□□□□□ -1.72
SRRM1-216ENST00000489130 TMEM258P61165 79 aa4.29□□□□□ -1.72
SRRM1-216ENST00000489130 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SRRM1-216ENST00000489130 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
SRRM1-216ENST00000489130 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SRRM1-216ENST00000489130 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
SRRM1-216ENST00000489130 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
SRRM1-216ENST00000489130 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
SRRM1-216ENST00000489130 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SRRM1-216ENST00000489130 K7ERS5 55 aa4.11□□□□□ -1.75
SRRM1-216ENST00000489130 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
SRRM1-216ENST00000489130 V9GYY9 64 aa4.07□□□□□ -1.76
SRRM1-216ENST00000489130 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SRRM1-216ENST00000489130 PSPHP1O15172 72 aa4.06□□□□□ -1.76
SRRM1-216ENST00000489130 Q1T7F1 81 aa4.05□□□□□ -1.76
SRRM1-216ENST00000489130 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SRRM1-216ENST00000489130 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
SRRM1-216ENST00000489130 KRTAP12-4P60329 112 aa4□□□□□ -1.77
SRRM1-216ENST00000489130 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
SRRM1-216ENST00000489130 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
SRRM1-216ENST00000489130 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SRRM1-216ENST00000489130 A6NED7 52 aa3.92□□□□□ -1.78
SRRM1-216ENST00000489130 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
SRRM1-216ENST00000489130 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
SRRM1-216ENST00000489130 ROMO1P60602 79 aa3.83□□□□□ -1.8
SRRM1-216ENST00000489130 MT1AP04731 61 aa3.8□□□□□ -1.8
SRRM1-216ENST00000489130 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SRRM1-216ENST00000489130 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
SRRM1-216ENST00000489130 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
SRRM1-216ENST00000489130 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
SRRM1-216ENST00000489130 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
SRRM1-216ENST00000489130 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
SRRM1-216ENST00000489130 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SRRM1-216ENST00000489130 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SRRM1-216ENST00000489130 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
SRRM1-216ENST00000489130 PCP4P48539 62 aa3.59□□□□□ -1.83
SRRM1-216ENST00000489130 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
SRRM1-216ENST00000489130 MT3P25713 68 aa3.47□□□□□ -1.85
SRRM1-216ENST00000489130 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SRRM1-216ENST00000489130 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
SRRM1-216ENST00000489130 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
SRRM1-216ENST00000489130 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SRRM1-216ENST00000489130 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
SRRM1-216ENST00000489130 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
SRRM1-216ENST00000489130 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SRRM1-216ENST00000489130 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SRRM1-216ENST00000489130 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
SRRM1-216ENST00000489130 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
SRRM1-216ENST00000489130 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SRRM1-216ENST00000489130 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
SRRM1-216ENST00000489130 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
SRRM1-216ENST00000489130 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
SRRM1-216ENST00000489130 LUZP6Q538Z0 58 aa2.53□□□□□ -2
SRRM1-216ENST00000489130 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SRRM1-216ENST00000489130 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SRRM1-216ENST00000489130 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SRRM1-216ENST00000489130 NDUFAF8A1L188 74 aa2.1□□□□□ -2.07
SRRM1-216ENST00000489130 PRM1P04553 51 aa1.95□□□□□ -2.1
SRRM1-216ENST00000489130 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
SRRM1-216ENST00000489130 INE1O15225 51 aa1.53□□□□□ -2.16
SRRM1-216ENST00000489130 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms