RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
COL16A1-215ENST00000488897 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
COL16A1-215ENST00000488897 INE1O15225 51 aa6.71□□□□□ -1.34
COL16A1-215ENST00000488897 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
COL16A1-215ENST00000488897 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
COL16A1-215ENST00000488897 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
COL16A1-215ENST00000488897 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
COL16A1-215ENST00000488897 NEBP20929 6669 aa6.49□□□□□ -1.37
COL16A1-215ENST00000488897 SPRR2EP22531 72 aa6.47□□□□□ -1.37
COL16A1-215ENST00000488897 SPRR2BP35325 72 aa6.47□□□□□ -1.37
COL16A1-215ENST00000488897 SPRR2AP35326 72 aa6.47□□□□□ -1.37
COL16A1-215ENST00000488897 MT1EP04732 61 aa6.47□□□□□ -1.37
COL16A1-215ENST00000488897 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
COL16A1-215ENST00000488897 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
COL16A1-215ENST00000488897 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
COL16A1-215ENST00000488897 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
COL16A1-215ENST00000488897 MT1LQ93083 61 aa6.28□□□□□ -1.4
COL16A1-215ENST00000488897 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
COL16A1-215ENST00000488897 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
COL16A1-215ENST00000488897 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
COL16A1-215ENST00000488897 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
COL16A1-215ENST00000488897 SPRR2DP22532 72 aa6.22□□□□□ -1.41
COL16A1-215ENST00000488897 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
COL16A1-215ENST00000488897 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
COL16A1-215ENST00000488897 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
COL16A1-215ENST00000488897 MT1GP13640 62 aa6.13□□□□□ -1.43
COL16A1-215ENST00000488897 MT1MQ8N339 61 aa6.13□□□□□ -1.43
COL16A1-215ENST00000488897 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
COL16A1-215ENST00000488897 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
COL16A1-215ENST00000488897 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
COL16A1-215ENST00000488897 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
COL16A1-215ENST00000488897 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
COL16A1-215ENST00000488897 MT4P47944 62 aa5.56□□□□□ -1.52
COL16A1-215ENST00000488897 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
COL16A1-215ENST00000488897 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
COL16A1-215ENST00000488897 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
COL16A1-215ENST00000488897 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
COL16A1-215ENST00000488897 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.54
COL16A1-215ENST00000488897 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
COL16A1-215ENST00000488897 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
COL16A1-215ENST00000488897 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
COL16A1-215ENST00000488897 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
COL16A1-215ENST00000488897 MT1AP04731 61 aa5.32□□□□□ -1.56
COL16A1-215ENST00000488897 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
COL16A1-215ENST00000488897 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
COL16A1-215ENST00000488897 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
COL16A1-215ENST00000488897 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
COL16A1-215ENST00000488897 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
COL16A1-215ENST00000488897 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
COL16A1-215ENST00000488897 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
COL16A1-215ENST00000488897 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
COL16A1-215ENST00000488897 PRM1P04553 51 aa4.85□□□□□ -1.63
COL16A1-215ENST00000488897 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
COL16A1-215ENST00000488897 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
COL16A1-215ENST00000488897 MT3P25713 68 aa4.78□□□□□ -1.64
COL16A1-215ENST00000488897 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
COL16A1-215ENST00000488897 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
COL16A1-215ENST00000488897 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
COL16A1-215ENST00000488897 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
COL16A1-215ENST00000488897 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
COL16A1-215ENST00000488897 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
COL16A1-215ENST00000488897 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
COL16A1-215ENST00000488897 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
COL16A1-215ENST00000488897 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
COL16A1-215ENST00000488897 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
COL16A1-215ENST00000488897 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
COL16A1-215ENST00000488897 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
COL16A1-215ENST00000488897 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
COL16A1-215ENST00000488897 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
COL16A1-215ENST00000488897 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
COL16A1-215ENST00000488897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
COL16A1-215ENST00000488897 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
COL16A1-215ENST00000488897 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
COL16A1-215ENST00000488897 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
COL16A1-215ENST00000488897 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
COL16A1-215ENST00000488897 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
COL16A1-215ENST00000488897 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
COL16A1-215ENST00000488897 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 138.4 ms