RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
ATP1A1-208ENST00000488733 MT1LQ93083 61 aa7.14□□□□□ -1.27
ATP1A1-208ENST00000488733 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
ATP1A1-208ENST00000488733 NDUFAF8A1L188 74 aa7.13□□□□□ -1.27
ATP1A1-208ENST00000488733 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
ATP1A1-208ENST00000488733 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
ATP1A1-208ENST00000488733 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
ATP1A1-208ENST00000488733 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
ATP1A1-208ENST00000488733 MT1GP13640 62 aa6.94□□□□□ -1.3
ATP1A1-208ENST00000488733 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
ATP1A1-208ENST00000488733 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.31
ATP1A1-208ENST00000488733 SPRR2EP22531 72 aa6.87□□□□□ -1.31
ATP1A1-208ENST00000488733 SPRR2BP35325 72 aa6.87□□□□□ -1.31
ATP1A1-208ENST00000488733 SPRR2AP35326 72 aa6.87□□□□□ -1.31
ATP1A1-208ENST00000488733 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
ATP1A1-208ENST00000488733 MT1MQ8N339 61 aa6.82□□□□□ -1.32
ATP1A1-208ENST00000488733 NEBP20929 6669 aa6.75□□□□□ -1.33
ATP1A1-208ENST00000488733 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
ATP1A1-208ENST00000488733 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
ATP1A1-208ENST00000488733 SPRR2DP22532 72 aa6.62□□□□□ -1.35
ATP1A1-208ENST00000488733 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
ATP1A1-208ENST00000488733 H3BS24 57 aa6.5□□□□□ -1.37
ATP1A1-208ENST00000488733 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
ATP1A1-208ENST00000488733 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
ATP1A1-208ENST00000488733 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
ATP1A1-208ENST00000488733 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
ATP1A1-208ENST00000488733 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
ATP1A1-208ENST00000488733 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
ATP1A1-208ENST00000488733 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
ATP1A1-208ENST00000488733 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
ATP1A1-208ENST00000488733 KRTAP5-5Q701N2 237 aaPredicted RBP6.15□□□□□ -1.42
ATP1A1-208ENST00000488733 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.43
ATP1A1-208ENST00000488733 MT1AP04731 61 aa6.08□□□□□ -1.44
ATP1A1-208ENST00000488733 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
ATP1A1-208ENST00000488733 INE1O15225 51 aa5.94□□□□□ -1.46
ATP1A1-208ENST00000488733 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
ATP1A1-208ENST00000488733 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
ATP1A1-208ENST00000488733 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
ATP1A1-208ENST00000488733 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
ATP1A1-208ENST00000488733 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
ATP1A1-208ENST00000488733 MT4P47944 62 aa5.75□□□□□ -1.49
ATP1A1-208ENST00000488733 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
ATP1A1-208ENST00000488733 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
ATP1A1-208ENST00000488733 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
ATP1A1-208ENST00000488733 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
ATP1A1-208ENST00000488733 MT3P25713 68 aa5.52□□□□□ -1.53
ATP1A1-208ENST00000488733 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
ATP1A1-208ENST00000488733 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
ATP1A1-208ENST00000488733 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
ATP1A1-208ENST00000488733 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
ATP1A1-208ENST00000488733 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
ATP1A1-208ENST00000488733 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
ATP1A1-208ENST00000488733 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
ATP1A1-208ENST00000488733 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
ATP1A1-208ENST00000488733 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
ATP1A1-208ENST00000488733 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
ATP1A1-208ENST00000488733 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
ATP1A1-208ENST00000488733 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
ATP1A1-208ENST00000488733 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
ATP1A1-208ENST00000488733 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
ATP1A1-208ENST00000488733 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
ATP1A1-208ENST00000488733 PRM1P04553 51 aa4.66□□□□□ -1.66
ATP1A1-208ENST00000488733 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
ATP1A1-208ENST00000488733 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
ATP1A1-208ENST00000488733 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
ATP1A1-208ENST00000488733 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
ATP1A1-208ENST00000488733 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
ATP1A1-208ENST00000488733 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
ATP1A1-208ENST00000488733 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
ATP1A1-208ENST00000488733 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
ATP1A1-208ENST00000488733 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
ATP1A1-208ENST00000488733 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
ATP1A1-208ENST00000488733 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
ATP1A1-208ENST00000488733 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
ATP1A1-208ENST00000488733 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
ATP1A1-208ENST00000488733 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
ATP1A1-208ENST00000488733 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
ATP1A1-208ENST00000488733 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms