RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
ITGB1-215ENST00000488494 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
ITGB1-215ENST00000488494 MT1GP13640 62 aa6.37□□□□□ -1.39
ITGB1-215ENST00000488494 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
ITGB1-215ENST00000488494 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
ITGB1-215ENST00000488494 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
ITGB1-215ENST00000488494 MT1LQ93083 61 aa6.33□□□□□ -1.4
ITGB1-215ENST00000488494 MT1MQ8N339 61 aa6.3□□□□□ -1.4
ITGB1-215ENST00000488494 UQCR11O14957 56 aa6.27□□□□□ -1.41
ITGB1-215ENST00000488494 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
ITGB1-215ENST00000488494 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
ITGB1-215ENST00000488494 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
ITGB1-215ENST00000488494 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
ITGB1-215ENST00000488494 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
ITGB1-215ENST00000488494 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
ITGB1-215ENST00000488494 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
ITGB1-215ENST00000488494 MT4P47944 62 aa6.06□□□□□ -1.44
ITGB1-215ENST00000488494 PSPHP1O15172 72 aa6.04□□□□□ -1.44
ITGB1-215ENST00000488494 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
ITGB1-215ENST00000488494 K7ERS5 55 aa6.02□□□□□ -1.45
ITGB1-215ENST00000488494 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
ITGB1-215ENST00000488494 V9GYY9 64 aa6.02□□□□□ -1.45
ITGB1-215ENST00000488494 KRTAP5-4Q6L8H1 288 aa5.99□□□□□ -1.45
ITGB1-215ENST00000488494 Q1T7F1 81 aa5.98□□□□□ -1.45
ITGB1-215ENST00000488494 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
ITGB1-215ENST00000488494 A6NED7 52 aa5.83□□□□□ -1.48
ITGB1-215ENST00000488494 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
ITGB1-215ENST00000488494 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
ITGB1-215ENST00000488494 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
ITGB1-215ENST00000488494 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
ITGB1-215ENST00000488494 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
ITGB1-215ENST00000488494 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
ITGB1-215ENST00000488494 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
ITGB1-215ENST00000488494 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
ITGB1-215ENST00000488494 ROMO1P60602 79 aa5.61□□□□□ -1.51
ITGB1-215ENST00000488494 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
ITGB1-215ENST00000488494 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
ITGB1-215ENST00000488494 PCP4P48539 62 aa5.55□□□□□ -1.52
ITGB1-215ENST00000488494 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
ITGB1-215ENST00000488494 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
ITGB1-215ENST00000488494 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
ITGB1-215ENST00000488494 MT1AP04731 61 aa5.38□□□□□ -1.55
ITGB1-215ENST00000488494 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
ITGB1-215ENST00000488494 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
ITGB1-215ENST00000488494 KRTAP5-2Q701N4 177 aa5.26□□□□□ -1.57
ITGB1-215ENST00000488494 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
ITGB1-215ENST00000488494 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
ITGB1-215ENST00000488494 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
ITGB1-215ENST00000488494 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
ITGB1-215ENST00000488494 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
ITGB1-215ENST00000488494 MT3P25713 68 aa4.9□□□□□ -1.63
ITGB1-215ENST00000488494 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
ITGB1-215ENST00000488494 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-215ENST00000488494 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
ITGB1-215ENST00000488494 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
ITGB1-215ENST00000488494 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
ITGB1-215ENST00000488494 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
ITGB1-215ENST00000488494 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
ITGB1-215ENST00000488494 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
ITGB1-215ENST00000488494 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
ITGB1-215ENST00000488494 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
ITGB1-215ENST00000488494 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
ITGB1-215ENST00000488494 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
ITGB1-215ENST00000488494 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
ITGB1-215ENST00000488494 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-215ENST00000488494 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
ITGB1-215ENST00000488494 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
ITGB1-215ENST00000488494 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
ITGB1-215ENST00000488494 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
ITGB1-215ENST00000488494 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
ITGB1-215ENST00000488494 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ITGB1-215ENST00000488494 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
ITGB1-215ENST00000488494 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
ITGB1-215ENST00000488494 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ITGB1-215ENST00000488494 PRM1P04553 51 aa2.88□□□□□ -1.95
ITGB1-215ENST00000488494 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
ITGB1-215ENST00000488494 INE1O15225 51 aa2.35□□□□□ -2.03
ITGB1-215ENST00000488494 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms