RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
NELFE-209ENST00000488426 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
NELFE-209ENST00000488426 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
NELFE-209ENST00000488426 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
NELFE-209ENST00000488426 SPRR2EP22531 72 aa4.81□□□□□ -1.64
NELFE-209ENST00000488426 SPRR2BP35325 72 aa4.81□□□□□ -1.64
NELFE-209ENST00000488426 SPRR2AP35326 72 aa4.81□□□□□ -1.64
NELFE-209ENST00000488426 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
NELFE-209ENST00000488426 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
NELFE-209ENST00000488426 INE1O15225 51 aa4.77□□□□□ -1.65
NELFE-209ENST00000488426 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
NELFE-209ENST00000488426 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
NELFE-209ENST00000488426 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
NELFE-209ENST00000488426 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
NELFE-209ENST00000488426 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
NELFE-209ENST00000488426 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
NELFE-209ENST00000488426 SPRR2DP22532 72 aa4.64□□□□□ -1.67
NELFE-209ENST00000488426 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
NELFE-209ENST00000488426 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
NELFE-209ENST00000488426 MT1EP04732 61 aa4.6□□□□□ -1.67
NELFE-209ENST00000488426 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
NELFE-209ENST00000488426 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
NELFE-209ENST00000488426 MT1LQ93083 61 aa4.52□□□□□ -1.69
NELFE-209ENST00000488426 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
NELFE-209ENST00000488426 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
NELFE-209ENST00000488426 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
NELFE-209ENST00000488426 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
NELFE-209ENST00000488426 MT1GP13640 62 aa4.39□□□□□ -1.71
NELFE-209ENST00000488426 MT1MQ8N339 61 aa4.33□□□□□ -1.72
NELFE-209ENST00000488426 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
NELFE-209ENST00000488426 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
NELFE-209ENST00000488426 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
NELFE-209ENST00000488426 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
NELFE-209ENST00000488426 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
NELFE-209ENST00000488426 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
NELFE-209ENST00000488426 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
NELFE-209ENST00000488426 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
NELFE-209ENST00000488426 MT4P47944 62 aa4.11□□□□□ -1.75
NELFE-209ENST00000488426 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
NELFE-209ENST00000488426 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
NELFE-209ENST00000488426 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
NELFE-209ENST00000488426 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
NELFE-209ENST00000488426 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
NELFE-209ENST00000488426 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
NELFE-209ENST00000488426 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
NELFE-209ENST00000488426 MT1AP04731 61 aa3.85□□□□□ -1.79
NELFE-209ENST00000488426 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
NELFE-209ENST00000488426 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
NELFE-209ENST00000488426 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
NELFE-209ENST00000488426 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
NELFE-209ENST00000488426 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
NELFE-209ENST00000488426 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
NELFE-209ENST00000488426 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
NELFE-209ENST00000488426 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
NELFE-209ENST00000488426 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
NELFE-209ENST00000488426 MT3P25713 68 aa3.48□□□□□ -1.85
NELFE-209ENST00000488426 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
NELFE-209ENST00000488426 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
NELFE-209ENST00000488426 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
NELFE-209ENST00000488426 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
NELFE-209ENST00000488426 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
NELFE-209ENST00000488426 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
NELFE-209ENST00000488426 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
NELFE-209ENST00000488426 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
NELFE-209ENST00000488426 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
NELFE-209ENST00000488426 PRM1P04553 51 aa3.13□□□□□ -1.91
NELFE-209ENST00000488426 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
NELFE-209ENST00000488426 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
NELFE-209ENST00000488426 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
NELFE-209ENST00000488426 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
NELFE-209ENST00000488426 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
NELFE-209ENST00000488426 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
NELFE-209ENST00000488426 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
NELFE-209ENST00000488426 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NELFE-209ENST00000488426 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
NELFE-209ENST00000488426 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
NELFE-209ENST00000488426 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
NELFE-209ENST00000488426 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 138.8 ms