RNA–Protein interactions for RNA: ENST00000488351.1

VEGFD-202, Transcript of vascular endothelial growth factor D, humanhuman

TSL 2

Gene VEGFD, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-202ENST00000488351 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
VEGFD-202ENST00000488351 USH2AO75445 5202 aa3.41□□□□□ -1.86
VEGFD-202ENST00000488351 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
VEGFD-202ENST00000488351 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
VEGFD-202ENST00000488351 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
VEGFD-202ENST00000488351 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
VEGFD-202ENST00000488351 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
VEGFD-202ENST00000488351 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
VEGFD-202ENST00000488351 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
VEGFD-202ENST00000488351 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
VEGFD-202ENST00000488351 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
VEGFD-202ENST00000488351 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
VEGFD-202ENST00000488351 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
VEGFD-202ENST00000488351 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
VEGFD-202ENST00000488351 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
VEGFD-202ENST00000488351 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
VEGFD-202ENST00000488351 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
VEGFD-202ENST00000488351 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
VEGFD-202ENST00000488351 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
VEGFD-202ENST00000488351 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
VEGFD-202ENST00000488351 MT1EP04732 61 aa3.08□□□□□ -1.92
VEGFD-202ENST00000488351 KMT2DO14686 5537 aa3.07□□□□□ -1.92
VEGFD-202ENST00000488351 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
VEGFD-202ENST00000488351 MT1LQ93083 61 aa3.02□□□□□ -1.93
VEGFD-202ENST00000488351 MT1GP13640 62 aa3□□□□□ -1.93
VEGFD-202ENST00000488351 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
VEGFD-202ENST00000488351 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
VEGFD-202ENST00000488351 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
VEGFD-202ENST00000488351 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
VEGFD-202ENST00000488351 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
VEGFD-202ENST00000488351 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
VEGFD-202ENST00000488351 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
VEGFD-202ENST00000488351 MT1MQ8N339 61 aa2.9□□□□□ -1.95
VEGFD-202ENST00000488351 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
VEGFD-202ENST00000488351 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
VEGFD-202ENST00000488351 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
VEGFD-202ENST00000488351 SPRR2EP22531 72 aa2.86□□□□□ -1.95
VEGFD-202ENST00000488351 SPRR2BP35325 72 aa2.86□□□□□ -1.95
VEGFD-202ENST00000488351 SPRR2AP35326 72 aa2.86□□□□□ -1.95
VEGFD-202ENST00000488351 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
VEGFD-202ENST00000488351 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
VEGFD-202ENST00000488351 SPRR2DP22532 72 aa2.76□□□□□ -1.97
VEGFD-202ENST00000488351 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
VEGFD-202ENST00000488351 NEBP20929 6669 aa2.69□□□□□ -1.98
VEGFD-202ENST00000488351 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
VEGFD-202ENST00000488351 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
VEGFD-202ENST00000488351 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
VEGFD-202ENST00000488351 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
VEGFD-202ENST00000488351 MT1AP04731 61 aa2.61□□□□□ -1.99
VEGFD-202ENST00000488351 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
VEGFD-202ENST00000488351 INE1O15225 51 aa2.57□□□□□ -2
VEGFD-202ENST00000488351 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
VEGFD-202ENST00000488351 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
VEGFD-202ENST00000488351 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
VEGFD-202ENST00000488351 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
VEGFD-202ENST00000488351 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
VEGFD-202ENST00000488351 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
VEGFD-202ENST00000488351 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
VEGFD-202ENST00000488351 MT4P47944 62 aa2.34□□□□□ -2.03
VEGFD-202ENST00000488351 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
VEGFD-202ENST00000488351 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
VEGFD-202ENST00000488351 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
VEGFD-202ENST00000488351 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
VEGFD-202ENST00000488351 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
VEGFD-202ENST00000488351 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
VEGFD-202ENST00000488351 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
VEGFD-202ENST00000488351 PRM1P04553 51 aa1.93□□□□□ -2.1
VEGFD-202ENST00000488351 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
VEGFD-202ENST00000488351 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
VEGFD-202ENST00000488351 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
VEGFD-202ENST00000488351 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
VEGFD-202ENST00000488351 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
VEGFD-202ENST00000488351 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
VEGFD-202ENST00000488351 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
VEGFD-202ENST00000488351 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
VEGFD-202ENST00000488351 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
VEGFD-202ENST00000488351 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
VEGFD-202ENST00000488351 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 83.7 ms