RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
CCDC180-205ENST00000487976 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
CCDC180-205ENST00000487976 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CCDC180-205ENST00000487976 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
CCDC180-205ENST00000487976 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
CCDC180-205ENST00000487976 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
CCDC180-205ENST00000487976 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
CCDC180-205ENST00000487976 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
CCDC180-205ENST00000487976 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
CCDC180-205ENST00000487976 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CCDC180-205ENST00000487976 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
CCDC180-205ENST00000487976 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
CCDC180-205ENST00000487976 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
CCDC180-205ENST00000487976 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
CCDC180-205ENST00000487976 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
CCDC180-205ENST00000487976 KMT2DO14686 5537 aa3.64□□□□□ -1.83
CCDC180-205ENST00000487976 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
CCDC180-205ENST00000487976 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
CCDC180-205ENST00000487976 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
CCDC180-205ENST00000487976 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
CCDC180-205ENST00000487976 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
CCDC180-205ENST00000487976 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
CCDC180-205ENST00000487976 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
CCDC180-205ENST00000487976 MT1EP04732 61 aa3.52□□□□□ -1.85
CCDC180-205ENST00000487976 MT1LQ93083 61 aa3.52□□□□□ -1.85
CCDC180-205ENST00000487976 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
CCDC180-205ENST00000487976 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
CCDC180-205ENST00000487976 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
CCDC180-205ENST00000487976 NEBP20929 6669 aa3.49□□□□□ -1.85
CCDC180-205ENST00000487976 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
CCDC180-205ENST00000487976 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
CCDC180-205ENST00000487976 MT3P25713 68 aa3.42□□□□□ -1.86
CCDC180-205ENST00000487976 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.86
CCDC180-205ENST00000487976 MT1GP13640 62 aa3.35□□□□□ -1.87
CCDC180-205ENST00000487976 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
CCDC180-205ENST00000487976 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
CCDC180-205ENST00000487976 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
CCDC180-205ENST00000487976 MT1MQ8N339 61 aa3.29□□□□□ -1.88
CCDC180-205ENST00000487976 PRM1P04553 51 aa3.21□□□□□ -1.9
CCDC180-205ENST00000487976 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
CCDC180-205ENST00000487976 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
CCDC180-205ENST00000487976 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
CCDC180-205ENST00000487976 MT1AP04731 61 aa3.16□□□□□ -1.9
CCDC180-205ENST00000487976 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
CCDC180-205ENST00000487976 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CCDC180-205ENST00000487976 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CCDC180-205ENST00000487976 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
CCDC180-205ENST00000487976 SPRR2EP22531 72 aa3.1□□□□□ -1.91
CCDC180-205ENST00000487976 SPRR2BP35325 72 aa3.1□□□□□ -1.91
CCDC180-205ENST00000487976 SPRR2AP35326 72 aa3.1□□□□□ -1.91
CCDC180-205ENST00000487976 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
CCDC180-205ENST00000487976 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
CCDC180-205ENST00000487976 SPRR2DP22532 72 aa2.98□□□□□ -1.93
CCDC180-205ENST00000487976 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
CCDC180-205ENST00000487976 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CCDC180-205ENST00000487976 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
CCDC180-205ENST00000487976 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
CCDC180-205ENST00000487976 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CCDC180-205ENST00000487976 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
CCDC180-205ENST00000487976 MT4P47944 62 aa2.67□□□□□ -1.98
CCDC180-205ENST00000487976 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.98
CCDC180-205ENST00000487976 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
CCDC180-205ENST00000487976 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CCDC180-205ENST00000487976 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
CCDC180-205ENST00000487976 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
CCDC180-205ENST00000487976 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
CCDC180-205ENST00000487976 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
CCDC180-205ENST00000487976 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CCDC180-205ENST00000487976 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CCDC180-205ENST00000487976 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
CCDC180-205ENST00000487976 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
CCDC180-205ENST00000487976 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CCDC180-205ENST00000487976 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
CCDC180-205ENST00000487976 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CCDC180-205ENST00000487976 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
CCDC180-205ENST00000487976 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CCDC180-205ENST00000487976 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
CCDC180-205ENST00000487976 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 86.5 ms