RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 MT2AP02795 61 aa1.42□□□□□ -2.18
GPNMB-212ENST00000487890 MT1FP04733 61 aa1.42□□□□□ -2.18
GPNMB-212ENST00000487890 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
GPNMB-212ENST00000487890 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
GPNMB-212ENST00000487890 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
GPNMB-212ENST00000487890 USH2AO75445 5202 aa1.41□□□□□ -2.18
GPNMB-212ENST00000487890 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.19
GPNMB-212ENST00000487890 K7EQZ3 153 aa1.4□□□□□ -2.19
GPNMB-212ENST00000487890 KRTAP12-1P59990 96 aa1.4□□□□□ -2.19
GPNMB-212ENST00000487890 MRPL34Q9BQ48 92 aaKnown RBP1.4□□□□□ -2.19
GPNMB-212ENST00000487890 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
GPNMB-212ENST00000487890 CRIPTQ9P021 101 aa1.38□□□□□ -2.19
GPNMB-212ENST00000487890 KRTAP5-5Q701N2 237 aaPredicted RBP1.37□□□□□ -2.19
GPNMB-212ENST00000487890 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
GPNMB-212ENST00000487890 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
GPNMB-212ENST00000487890 S4R3F8 94 aa1.36□□□□□ -2.19
GPNMB-212ENST00000487890 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
GPNMB-212ENST00000487890 OBSCNQ5VST9 7968 aa1.35□□□□□ -2.19
GPNMB-212ENST00000487890 KRTAP19-6Q3LI70 58 aa1.34□□□□□ -2.19
GPNMB-212ENST00000487890 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
GPNMB-212ENST00000487890 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
GPNMB-212ENST00000487890 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
GPNMB-212ENST00000487890 MT1BP07438 61 aa1.28□□□□□ -2.2
GPNMB-212ENST00000487890 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
GPNMB-212ENST00000487890 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
GPNMB-212ENST00000487890 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
GPNMB-212ENST00000487890 KRTAP19-8Q3LI54 63 aa1.27□□□□□ -2.21
GPNMB-212ENST00000487890 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
GPNMB-212ENST00000487890 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
GPNMB-212ENST00000487890 H0YAA0 97 aa1.25□□□□□ -2.21
GPNMB-212ENST00000487890 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
GPNMB-212ENST00000487890 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
GPNMB-212ENST00000487890 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
GPNMB-212ENST00000487890 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
GPNMB-212ENST00000487890 KMT2DO14686 5537 aa1.23□□□□□ -2.21
GPNMB-212ENST00000487890 M0QZ58 72 aa1.23□□□□□ -2.21
GPNMB-212ENST00000487890 SPRR2FQ96RM1 72 aa1.23□□□□□ -2.21
GPNMB-212ENST00000487890 NEBP20929 6669 aa1.22□□□□□ -2.21
GPNMB-212ENST00000487890 SPRR2EP22531 72 aa1.22□□□□□ -2.21
GPNMB-212ENST00000487890 SPRR2BP35325 72 aa1.22□□□□□ -2.21
GPNMB-212ENST00000487890 SPRR2AP35326 72 aa1.22□□□□□ -2.21
GPNMB-212ENST00000487890 MT1XP80297 61 aa1.21□□□□□ -2.22
GPNMB-212ENST00000487890 KRTAP8-1Q8IUC2 63 aa1.21□□□□□ -2.22
GPNMB-212ENST00000487890 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
GPNMB-212ENST00000487890 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
GPNMB-212ENST00000487890 SPRR2DP22532 72 aa1.17□□□□□ -2.22
GPNMB-212ENST00000487890 A0A0D9SG42 100 aa1.14□□□□□ -2.23
GPNMB-212ENST00000487890 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
GPNMB-212ENST00000487890 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
GPNMB-212ENST00000487890 MT1EP04732 61 aa1.07□□□□□ -2.24
GPNMB-212ENST00000487890 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
GPNMB-212ENST00000487890 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
GPNMB-212ENST00000487890 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
GPNMB-212ENST00000487890 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
GPNMB-212ENST00000487890 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
GPNMB-212ENST00000487890 KRTAP5-8O75690 187 aa1.05□□□□□ -2.24
GPNMB-212ENST00000487890 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
GPNMB-212ENST00000487890 TNP1P09430 55 aa1.04□□□□□ -2.24
GPNMB-212ENST00000487890 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.24
GPNMB-212ENST00000487890 MT1GP13640 62 aa1.03□□□□□ -2.24
GPNMB-212ENST00000487890 MT4P47944 62 aa1.03□□□□□ -2.24
GPNMB-212ENST00000487890 MT1MQ8N339 61 aa1.02□□□□□ -2.25
GPNMB-212ENST00000487890 MT1LQ93083 61 aa1.02□□□□□ -2.25
GPNMB-212ENST00000487890 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
GPNMB-212ENST00000487890 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
GPNMB-212ENST00000487890 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
GPNMB-212ENST00000487890 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
GPNMB-212ENST00000487890 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
GPNMB-212ENST00000487890 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
GPNMB-212ENST00000487890 MT1AP04731 61 aa0.86□□□□□ -2.27
GPNMB-212ENST00000487890 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
GPNMB-212ENST00000487890 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
GPNMB-212ENST00000487890 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.28
GPNMB-212ENST00000487890 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
GPNMB-212ENST00000487890 PRM1P04553 51 aa0.75□□□□□ -2.29
GPNMB-212ENST00000487890 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
GPNMB-212ENST00000487890 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
GPNMB-212ENST00000487890 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms