RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 COA5Q86WW8 74 aa2.7□□□□□ -1.98
SEC22C-215ENST00000487701 LINC01554Q52M75 96 aa2.69□□□□□ -1.98
SEC22C-215ENST00000487701 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SEC22C-215ENST00000487701 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
SEC22C-215ENST00000487701 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
SEC22C-215ENST00000487701 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
SEC22C-215ENST00000487701 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
SEC22C-215ENST00000487701 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
SEC22C-215ENST00000487701 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
SEC22C-215ENST00000487701 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
SEC22C-215ENST00000487701 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
SEC22C-215ENST00000487701 KMT2DO14686 5537 aa2.62□□□□□ -1.99
SEC22C-215ENST00000487701 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
SEC22C-215ENST00000487701 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
SEC22C-215ENST00000487701 NEBP20929 6669 aa2.56□□□□□ -2
SEC22C-215ENST00000487701 A0A1B0GU33 70 aa2.56□□□□□ -2
SEC22C-215ENST00000487701 A0A0D9SG42 100 aa2.55□□□□□ -2
SEC22C-215ENST00000487701 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
SEC22C-215ENST00000487701 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
SEC22C-215ENST00000487701 A0A1B0GU69 56 aa2.54□□□□□ -2
SEC22C-215ENST00000487701 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SEC22C-215ENST00000487701 Q1T7F1 81 aa2.54□□□□□ -2
SEC22C-215ENST00000487701 CAMK2N1Q7Z7J9 78 aa2.54□□□□□ -2
SEC22C-215ENST00000487701 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
SEC22C-215ENST00000487701 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
SEC22C-215ENST00000487701 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
SEC22C-215ENST00000487701 SPRR2EP22531 72 aa2.49□□□□□ -2.01
SEC22C-215ENST00000487701 SPRR2BP35325 72 aa2.49□□□□□ -2.01
SEC22C-215ENST00000487701 SPRR2AP35326 72 aa2.49□□□□□ -2.01
SEC22C-215ENST00000487701 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
SEC22C-215ENST00000487701 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
SEC22C-215ENST00000487701 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
SEC22C-215ENST00000487701 A6NED7 52 aa2.46□□□□□ -2.02
SEC22C-215ENST00000487701 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
SEC22C-215ENST00000487701 K7ERS5 55 aa2.45□□□□□ -2.02
SEC22C-215ENST00000487701 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
SEC22C-215ENST00000487701 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
SEC22C-215ENST00000487701 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
SEC22C-215ENST00000487701 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
SEC22C-215ENST00000487701 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
SEC22C-215ENST00000487701 SPRR2DP22532 72 aa2.4□□□□□ -2.03
SEC22C-215ENST00000487701 UQCR11O14957 56 aa2.39□□□□□ -2.03
SEC22C-215ENST00000487701 MT1EP04732 61 aa2.39□□□□□ -2.03
SEC22C-215ENST00000487701 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
SEC22C-215ENST00000487701 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
SEC22C-215ENST00000487701 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
SEC22C-215ENST00000487701 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
SEC22C-215ENST00000487701 TNP1P09430 55 aa2.34□□□□□ -2.03
SEC22C-215ENST00000487701 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
SEC22C-215ENST00000487701 ROMO1P60602 79 aa2.33□□□□□ -2.04
SEC22C-215ENST00000487701 MT1LQ93083 61 aa2.3□□□□□ -2.04
SEC22C-215ENST00000487701 MT1GP13640 62 aa2.28□□□□□ -2.04
SEC22C-215ENST00000487701 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
SEC22C-215ENST00000487701 MT1MQ8N339 61 aa2.27□□□□□ -2.05
SEC22C-215ENST00000487701 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SEC22C-215ENST00000487701 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
SEC22C-215ENST00000487701 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
SEC22C-215ENST00000487701 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
SEC22C-215ENST00000487701 MT4P47944 62 aa2.11□□□□□ -2.07
SEC22C-215ENST00000487701 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
SEC22C-215ENST00000487701 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
SEC22C-215ENST00000487701 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
SEC22C-215ENST00000487701 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
SEC22C-215ENST00000487701 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
SEC22C-215ENST00000487701 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
SEC22C-215ENST00000487701 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
SEC22C-215ENST00000487701 MT1AP04731 61 aa1.95□□□□□ -2.1
SEC22C-215ENST00000487701 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
SEC22C-215ENST00000487701 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
SEC22C-215ENST00000487701 INE1O15225 51 aa1.92□□□□□ -2.1
SEC22C-215ENST00000487701 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
SEC22C-215ENST00000487701 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
SEC22C-215ENST00000487701 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
SEC22C-215ENST00000487701 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
SEC22C-215ENST00000487701 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
SEC22C-215ENST00000487701 PRM1P04553 51 aa1.12□□□□□ -2.23
SEC22C-215ENST00000487701 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SEC22C-215ENST00000487701 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 29.4 ms