RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 TNP1P09430 55 aa8.65□□□□□ -1.02
SEMA3C-209ENST00000487621 KRTAP4-3Q9BYR4 195 aa8.64□□□□□ -1.03
SEMA3C-209ENST00000487621 MT4P47944 62 aa8.62□□□□□ -1.03
SEMA3C-209ENST00000487621 KRTAP5-4Q6L8H1 288 aa8.58□□□□□ -1.04
SEMA3C-209ENST00000487621 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
SEMA3C-209ENST00000487621 AHNAK2Q8IVF2 5795 aa8.47□□□□□ -1.05
SEMA3C-209ENST00000487621 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
SEMA3C-209ENST00000487621 KRTAP4-7Q9BYR0 210 aa8.4□□□□□ -1.06
SEMA3C-209ENST00000487621 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
SEMA3C-209ENST00000487621 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
SEMA3C-209ENST00000487621 TMEM258P61165 79 aa8.29□□□□□ -1.08
SEMA3C-209ENST00000487621 KRTAP5-10Q6L8G5 202 aa8.29□□□□□ -1.08
SEMA3C-209ENST00000487621 UQCR11O14957 56 aa8.2□□□□□ -1.1
SEMA3C-209ENST00000487621 KRTAP5-5Q701N2 237 aaPredicted RBP8.17□□□□□ -1.1
SEMA3C-209ENST00000487621 KRTAP20-2Q3LI61 65 aa8.08□□□□□ -1.12
SEMA3C-209ENST00000487621 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
SEMA3C-209ENST00000487621 KRTAP5-3Q6L8H2 238 aa8.04□□□□□ -1.12
SEMA3C-209ENST00000487621 KRTAP4-12Q9BQ66 201 aa8.02□□□□□ -1.13
SEMA3C-209ENST00000487621 SPRR5A0A1B0GTR4 108 aa8.01□□□□□ -1.13
SEMA3C-209ENST00000487621 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
SEMA3C-209ENST00000487621 KRTAP5-7Q6L8G8 165 aa7.98□□□□□ -1.13
SEMA3C-209ENST00000487621 SYNE1Q8NF91 8797 aaKnown RBP7.93□□□□□ -1.14
SEMA3C-209ENST00000487621 KRTAP12-4P60329 112 aa7.91□□□□□ -1.14
SEMA3C-209ENST00000487621 KRTAP19-4Q3LI73 84 aa7.89□□□□□ -1.15
SEMA3C-209ENST00000487621 PSPHP1O15172 72 aa7.86□□□□□ -1.15
SEMA3C-209ENST00000487621 H3BS24 57 aa7.82□□□□□ -1.16
SEMA3C-209ENST00000487621 K7ERS5 55 aa7.81□□□□□ -1.16
SEMA3C-209ENST00000487621 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
SEMA3C-209ENST00000487621 Q1T7F1 81 aa7.79□□□□□ -1.16
SEMA3C-209ENST00000487621 V9GYY9 64 aa7.78□□□□□ -1.16
SEMA3C-209ENST00000487621 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
SEMA3C-209ENST00000487621 KRTAP9-9Q9BYP9 154 aa7.74□□□□□ -1.17
SEMA3C-209ENST00000487621 KRTAP9-4Q9BYQ2 154 aa7.74□□□□□ -1.17
SEMA3C-209ENST00000487621 LCE3CQ5T5A8 94 aa7.7□□□□□ -1.18
SEMA3C-209ENST00000487621 A6NED7 52 aa7.55□□□□□ -1.2
SEMA3C-209ENST00000487621 MT1AP04731 61 aa7.5□□□□□ -1.21
SEMA3C-209ENST00000487621 KRTAP6-1Q3LI64 71 aa7.49□□□□□ -1.21
SEMA3C-209ENST00000487621 KRTAP5-2Q701N4 177 aa7.49□□□□□ -1.21
SEMA3C-209ENST00000487621 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
SEMA3C-209ENST00000487621 KRTAP4-11Q9BYQ6 195 aa7.41□□□□□ -1.22
SEMA3C-209ENST00000487621 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
SEMA3C-209ENST00000487621 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
SEMA3C-209ENST00000487621 ROMO1P60602 79 aa7.31□□□□□ -1.24
SEMA3C-209ENST00000487621 PCP4P48539 62 aa7.23□□□□□ -1.25
SEMA3C-209ENST00000487621 KRTAP5-8O75690 187 aa7.2□□□□□ -1.26
SEMA3C-209ENST00000487621 KRTAP6-2Q3LI66 62 aa7.16□□□□□ -1.26
SEMA3C-209ENST00000487621 MUC5BQ9HC84 5762 aaPredicted RBP7.02□□□□□ -1.29
SEMA3C-209ENST00000487621 OBSCNQ5VST9 7968 aa7.01□□□□□ -1.29
SEMA3C-209ENST00000487621 AHNAKQ09666 5890 aaKnown RBP6.99□□□□□ -1.29
SEMA3C-209ENST00000487621 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
SEMA3C-209ENST00000487621 MUC5ACP98088 5654 aa6.96□□□□□ -1.29
SEMA3C-209ENST00000487621 MT3P25713 68 aa6.85□□□□□ -1.31
SEMA3C-209ENST00000487621 KRTAP5-1Q6L8H4 278 aa6.75□□□□□ -1.33
SEMA3C-209ENST00000487621 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
SEMA3C-209ENST00000487621 LCE1EQ5T753 118 aa6.36□□□□□ -1.39
SEMA3C-209ENST00000487621 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
SEMA3C-209ENST00000487621 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.46
SEMA3C-209ENST00000487621 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
SEMA3C-209ENST00000487621 LCE1CQ5T751 118 aa5.91□□□□□ -1.46
SEMA3C-209ENST00000487621 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
SEMA3C-209ENST00000487621 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
SEMA3C-209ENST00000487621 KRTAP5-11Q6L8G4 156 aa5.38□□□□□ -1.55
SEMA3C-209ENST00000487621 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
SEMA3C-209ENST00000487621 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
SEMA3C-209ENST00000487621 LCE1FQ5T754 118 aa5.26□□□□□ -1.57
SEMA3C-209ENST00000487621 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
SEMA3C-209ENST00000487621 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
SEMA3C-209ENST00000487621 KRTAP21-2Q3LI59 83 aa4.95□□□□□ -1.62
SEMA3C-209ENST00000487621 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
SEMA3C-209ENST00000487621 PHGR1C9JFL3 82 aa4.79□□□□□ -1.64
SEMA3C-209ENST00000487621 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SEMA3C-209ENST00000487621 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
SEMA3C-209ENST00000487621 MUC19Q7Z5P9 8384 aa4.33□□□□□ -1.72
SEMA3C-209ENST00000487621 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
SEMA3C-209ENST00000487621 PRM1P04553 51 aa3.77□□□□□ -1.81
SEMA3C-209ENST00000487621 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
SEMA3C-209ENST00000487621 MUC16Q8WXI7 14507 aa3.13□□□□□ -1.91
SEMA3C-209ENST00000487621 INE1O15225 51 aa3.02□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 57.6 ms