RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
NF1-211ENST00000487476 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
NF1-211ENST00000487476 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
NF1-211ENST00000487476 MT1EP04732 61 aa6.2□□□□□ -1.42
NF1-211ENST00000487476 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
NF1-211ENST00000487476 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
NF1-211ENST00000487476 SPRR2EP22531 72 aa6.08□□□□□ -1.44
NF1-211ENST00000487476 SPRR2BP35325 72 aa6.08□□□□□ -1.44
NF1-211ENST00000487476 SPRR2AP35326 72 aa6.08□□□□□ -1.44
NF1-211ENST00000487476 MT1LQ93083 61 aa6.03□□□□□ -1.44
NF1-211ENST00000487476 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
NF1-211ENST00000487476 NEBP20929 6669 aa5.98□□□□□ -1.45
NF1-211ENST00000487476 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
NF1-211ENST00000487476 MT1GP13640 62 aa5.91□□□□□ -1.46
NF1-211ENST00000487476 SPRR2DP22532 72 aa5.86□□□□□ -1.47
NF1-211ENST00000487476 MT1MQ8N339 61 aa5.86□□□□□ -1.47
NF1-211ENST00000487476 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
NF1-211ENST00000487476 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
NF1-211ENST00000487476 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
NF1-211ENST00000487476 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
NF1-211ENST00000487476 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
NF1-211ENST00000487476 INE1O15225 51 aa5.69□□□□□ -1.5
NF1-211ENST00000487476 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
NF1-211ENST00000487476 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
NF1-211ENST00000487476 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
NF1-211ENST00000487476 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
NF1-211ENST00000487476 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
NF1-211ENST00000487476 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
NF1-211ENST00000487476 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
NF1-211ENST00000487476 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
NF1-211ENST00000487476 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
NF1-211ENST00000487476 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
NF1-211ENST00000487476 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
NF1-211ENST00000487476 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
NF1-211ENST00000487476 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
NF1-211ENST00000487476 MT4P47944 62 aa5.13□□□□□ -1.59
NF1-211ENST00000487476 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
NF1-211ENST00000487476 MT1AP04731 61 aa5.09□□□□□ -1.59
NF1-211ENST00000487476 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
NF1-211ENST00000487476 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
NF1-211ENST00000487476 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
NF1-211ENST00000487476 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
NF1-211ENST00000487476 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.62
NF1-211ENST00000487476 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
NF1-211ENST00000487476 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
NF1-211ENST00000487476 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
NF1-211ENST00000487476 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
NF1-211ENST00000487476 MT3P25713 68 aa4.63□□□□□ -1.67
NF1-211ENST00000487476 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
NF1-211ENST00000487476 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
NF1-211ENST00000487476 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
NF1-211ENST00000487476 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
NF1-211ENST00000487476 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
NF1-211ENST00000487476 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
NF1-211ENST00000487476 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
NF1-211ENST00000487476 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
NF1-211ENST00000487476 PRM1P04553 51 aa4.18□□□□□ -1.74
NF1-211ENST00000487476 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
NF1-211ENST00000487476 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
NF1-211ENST00000487476 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
NF1-211ENST00000487476 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
NF1-211ENST00000487476 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
NF1-211ENST00000487476 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
NF1-211ENST00000487476 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
NF1-211ENST00000487476 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
NF1-211ENST00000487476 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
NF1-211ENST00000487476 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
NF1-211ENST00000487476 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NF1-211ENST00000487476 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.85
NF1-211ENST00000487476 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
NF1-211ENST00000487476 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
NF1-211ENST00000487476 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
NF1-211ENST00000487476 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NF1-211ENST00000487476 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
NF1-211ENST00000487476 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
NF1-211ENST00000487476 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
NF1-211ENST00000487476 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 180.7 ms