RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 A0A1B0GU33 70 aa2.8□□□□□ -1.96
UBE4B-209ENST00000487244 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
UBE4B-209ENST00000487244 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
UBE4B-209ENST00000487244 A0A1B0GU69 56 aa2.76□□□□□ -1.97
UBE4B-209ENST00000487244 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
UBE4B-209ENST00000487244 A8MU10 97 aa2.74□□□□□ -1.97
UBE4B-209ENST00000487244 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
UBE4B-209ENST00000487244 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
UBE4B-209ENST00000487244 SPRR2DP22532 72 aa2.73□□□□□ -1.97
UBE4B-209ENST00000487244 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
UBE4B-209ENST00000487244 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
UBE4B-209ENST00000487244 SMIM26A0A096LP01 95 aa2.69□□□□□ -1.98
UBE4B-209ENST00000487244 TMEM258P61165 79 aa2.69□□□□□ -1.98
UBE4B-209ENST00000487244 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
UBE4B-209ENST00000487244 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
UBE4B-209ENST00000487244 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
UBE4B-209ENST00000487244 LINC01558Q9Y6Z2 57 aa2.68□□□□□ -1.98
UBE4B-209ENST00000487244 MT1EP04732 61 aa2.67□□□□□ -1.98
UBE4B-209ENST00000487244 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
UBE4B-209ENST00000487244 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
UBE4B-209ENST00000487244 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
UBE4B-209ENST00000487244 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
UBE4B-209ENST00000487244 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
UBE4B-209ENST00000487244 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
UBE4B-209ENST00000487244 UQCR11O14957 56 aa2.59□□□□□ -1.99
UBE4B-209ENST00000487244 TNP1P09430 55 aa2.58□□□□□ -2
UBE4B-209ENST00000487244 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
UBE4B-209ENST00000487244 MT1LQ93083 61 aa2.56□□□□□ -2
UBE4B-209ENST00000487244 PSPHP1O15172 72 aa2.55□□□□□ -2
UBE4B-209ENST00000487244 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
UBE4B-209ENST00000487244 MT1GP13640 62 aa2.54□□□□□ -2
UBE4B-209ENST00000487244 MT1MQ8N339 61 aa2.54□□□□□ -2
UBE4B-209ENST00000487244 Q1T7F1 81 aa2.52□□□□□ -2.01
UBE4B-209ENST00000487244 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
UBE4B-209ENST00000487244 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
UBE4B-209ENST00000487244 V9GYY9 64 aa2.5□□□□□ -2.01
UBE4B-209ENST00000487244 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
UBE4B-209ENST00000487244 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
UBE4B-209ENST00000487244 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
UBE4B-209ENST00000487244 K7ERS5 55 aa2.45□□□□□ -2.02
UBE4B-209ENST00000487244 A6NED7 52 aa2.44□□□□□ -2.02
UBE4B-209ENST00000487244 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
UBE4B-209ENST00000487244 MT4P47944 62 aa2.4□□□□□ -2.03
UBE4B-209ENST00000487244 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
UBE4B-209ENST00000487244 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
UBE4B-209ENST00000487244 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
UBE4B-209ENST00000487244 ROMO1P60602 79 aa2.33□□□□□ -2.04
UBE4B-209ENST00000487244 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
UBE4B-209ENST00000487244 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
UBE4B-209ENST00000487244 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
UBE4B-209ENST00000487244 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
UBE4B-209ENST00000487244 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
UBE4B-209ENST00000487244 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
UBE4B-209ENST00000487244 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
UBE4B-209ENST00000487244 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
UBE4B-209ENST00000487244 MT1AP04731 61 aa2.17□□□□□ -2.06
UBE4B-209ENST00000487244 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
UBE4B-209ENST00000487244 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
UBE4B-209ENST00000487244 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
UBE4B-209ENST00000487244 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
UBE4B-209ENST00000487244 BRK1Q8WUW1 75 aa2.14□□□□□ -2.07
UBE4B-209ENST00000487244 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
UBE4B-209ENST00000487244 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
UBE4B-209ENST00000487244 PMAIP1Q13794 54 aa2□□□□□ -2.09
UBE4B-209ENST00000487244 LUZP6Q538Z0 58 aa2□□□□□ -2.09
UBE4B-209ENST00000487244 PRO0628Q9UI54 55 aa1.99□□□□□ -2.09
UBE4B-209ENST00000487244 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
UBE4B-209ENST00000487244 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
UBE4B-209ENST00000487244 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
UBE4B-209ENST00000487244 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
UBE4B-209ENST00000487244 KTN1-AS1Q86SY8 53 aa1.79□□□□□ -2.12
UBE4B-209ENST00000487244 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
UBE4B-209ENST00000487244 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
UBE4B-209ENST00000487244 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
UBE4B-209ENST00000487244 PRM1P04553 51 aa1.21□□□□□ -2.22
UBE4B-209ENST00000487244 INE1O15225 51 aa1.1□□□□□ -2.23
UBE4B-209ENST00000487244 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
UBE4B-209ENST00000487244 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms