RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MT1BP07438 61 aa2.7□□□□□ -1.98
RTFDC1-209ENST00000487211 P0C880 135 aa2.7□□□□□ -1.98
RTFDC1-209ENST00000487211 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
RTFDC1-209ENST00000487211 H7BZZ5 65 aa2.69□□□□□ -1.98
RTFDC1-209ENST00000487211 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
RTFDC1-209ENST00000487211 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
RTFDC1-209ENST00000487211 CCDC179H3BU77 68 aa2.67□□□□□ -1.98
RTFDC1-209ENST00000487211 CHKB-CPT1BH3BT56 60 aa2.66□□□□□ -1.98
RTFDC1-209ENST00000487211 RPS28P62857 69 aaKnown RBP2.66□□□□□ -1.98
RTFDC1-209ENST00000487211 Q5VV11 94 aa2.66□□□□□ -1.98
RTFDC1-209ENST00000487211 R4GN34 69 aa2.65□□□□□ -1.99
RTFDC1-209ENST00000487211 K7ERS5 55 aa2.64□□□□□ -1.99
RTFDC1-209ENST00000487211 COA5Q86WW8 74 aa2.64□□□□□ -1.99
RTFDC1-209ENST00000487211 SPTSSBQ8NFR3 76 aa2.64□□□□□ -1.99
RTFDC1-209ENST00000487211 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
RTFDC1-209ENST00000487211 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
RTFDC1-209ENST00000487211 M0QZ58 72 aa2.61□□□□□ -1.99
RTFDC1-209ENST00000487211 A6NN06 94 aa2.59□□□□□ -1.99
RTFDC1-209ENST00000487211 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
RTFDC1-209ENST00000487211 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
RTFDC1-209ENST00000487211 LINC01554Q52M75 96 aa2.58□□□□□ -2
RTFDC1-209ENST00000487211 SPRR2EP22531 72 aa2.57□□□□□ -2
RTFDC1-209ENST00000487211 SPRR2BP35325 72 aa2.57□□□□□ -2
RTFDC1-209ENST00000487211 SPRR2AP35326 72 aa2.57□□□□□ -2
RTFDC1-209ENST00000487211 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
RTFDC1-209ENST00000487211 PLAC4Q8WY50 150 aa2.56□□□□□ -2
RTFDC1-209ENST00000487211 A6NED7 52 aa2.55□□□□□ -2
RTFDC1-209ENST00000487211 MT1XP80297 61 aa2.55□□□□□ -2
RTFDC1-209ENST00000487211 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
RTFDC1-209ENST00000487211 ATP5EP56381 51 aaPredicted RBP2.53□□□□□ -2
RTFDC1-209ENST00000487211 LCE1CQ5T751 118 aa2.53□□□□□ -2
RTFDC1-209ENST00000487211 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
RTFDC1-209ENST00000487211 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
RTFDC1-209ENST00000487211 TMEM258P61165 79 aa2.52□□□□□ -2.01
RTFDC1-209ENST00000487211 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
RTFDC1-209ENST00000487211 A0A1B0GU33 70 aa2.51□□□□□ -2.01
RTFDC1-209ENST00000487211 SPATA8Q6RVD6 105 aa2.51□□□□□ -2.01
RTFDC1-209ENST00000487211 BRK1Q8WUW1 75 aa2.5□□□□□ -2.01
RTFDC1-209ENST00000487211 A0A1B0GU69 56 aa2.49□□□□□ -2.01
RTFDC1-209ENST00000487211 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
RTFDC1-209ENST00000487211 A0A0D9SG42 100 aa2.48□□□□□ -2.01
RTFDC1-209ENST00000487211 SPRR2DP22532 72 aa2.48□□□□□ -2.01
RTFDC1-209ENST00000487211 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
RTFDC1-209ENST00000487211 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
RTFDC1-209ENST00000487211 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
RTFDC1-209ENST00000487211 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
RTFDC1-209ENST00000487211 Q1T7F1 81 aa2.38□□□□□ -2.03
RTFDC1-209ENST00000487211 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
RTFDC1-209ENST00000487211 UQCR11O14957 56 aa2.37□□□□□ -2.03
RTFDC1-209ENST00000487211 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
RTFDC1-209ENST00000487211 MIR22HGQ0VDD5 57 aa2.34□□□□□ -2.03
RTFDC1-209ENST00000487211 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
RTFDC1-209ENST00000487211 MT4P47944 62 aa2.29□□□□□ -2.04
RTFDC1-209ENST00000487211 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
RTFDC1-209ENST00000487211 TNP1P09430 55 aa2.26□□□□□ -2.05
RTFDC1-209ENST00000487211 ROMO1P60602 79 aa2.26□□□□□ -2.05
RTFDC1-209ENST00000487211 MT1EP04732 61 aa2.25□□□□□ -2.05
RTFDC1-209ENST00000487211 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
RTFDC1-209ENST00000487211 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
RTFDC1-209ENST00000487211 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
RTFDC1-209ENST00000487211 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
RTFDC1-209ENST00000487211 MT1LQ93083 61 aa2.17□□□□□ -2.06
RTFDC1-209ENST00000487211 MT1GP13640 62 aa2.16□□□□□ -2.06
RTFDC1-209ENST00000487211 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
RTFDC1-209ENST00000487211 MT1MQ8N339 61 aa2.13□□□□□ -2.07
RTFDC1-209ENST00000487211 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
RTFDC1-209ENST00000487211 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
RTFDC1-209ENST00000487211 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
RTFDC1-209ENST00000487211 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
RTFDC1-209ENST00000487211 INE1O15225 51 aa1.9□□□□□ -2.11
RTFDC1-209ENST00000487211 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
RTFDC1-209ENST00000487211 MT1AP04731 61 aa1.83□□□□□ -2.12
RTFDC1-209ENST00000487211 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
RTFDC1-209ENST00000487211 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
RTFDC1-209ENST00000487211 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
RTFDC1-209ENST00000487211 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
RTFDC1-209ENST00000487211 PRM1P04553 51 aa1.11□□□□□ -2.23
RTFDC1-209ENST00000487211 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 119.6 ms