RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
PCOLCE-208ENST00000487172 SPRR2DP22532 72 aa6.98□□□□□ -1.29
PCOLCE-208ENST00000487172 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
PCOLCE-208ENST00000487172 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
PCOLCE-208ENST00000487172 KRTAP20-1Q3LI63 56 aa6.95□□□□□ -1.3
PCOLCE-208ENST00000487172 MT1GP13640 62 aa6.93□□□□□ -1.3
PCOLCE-208ENST00000487172 KRTAP2-3P0C7H8 128 aa6.92□□□□□ -1.3
PCOLCE-208ENST00000487172 MT1LQ93083 61 aa6.92□□□□□ -1.3
PCOLCE-208ENST00000487172 KRTAP2-4Q9BYR9 128 aa6.92□□□□□ -1.3
PCOLCE-208ENST00000487172 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
PCOLCE-208ENST00000487172 MT1MQ8N339 61 aa6.79□□□□□ -1.32
PCOLCE-208ENST00000487172 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
PCOLCE-208ENST00000487172 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
PCOLCE-208ENST00000487172 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
PCOLCE-208ENST00000487172 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
PCOLCE-208ENST00000487172 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
PCOLCE-208ENST00000487172 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
PCOLCE-208ENST00000487172 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
PCOLCE-208ENST00000487172 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
PCOLCE-208ENST00000487172 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
PCOLCE-208ENST00000487172 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
PCOLCE-208ENST00000487172 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
PCOLCE-208ENST00000487172 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
PCOLCE-208ENST00000487172 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
PCOLCE-208ENST00000487172 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
PCOLCE-208ENST00000487172 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
PCOLCE-208ENST00000487172 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
PCOLCE-208ENST00000487172 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
PCOLCE-208ENST00000487172 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
PCOLCE-208ENST00000487172 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
PCOLCE-208ENST00000487172 KRTAP9-6A8MVA2 160 aa6.09□□□□□ -1.43
PCOLCE-208ENST00000487172 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
PCOLCE-208ENST00000487172 MT4P47944 62 aa6.06□□□□□ -1.44
PCOLCE-208ENST00000487172 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
PCOLCE-208ENST00000487172 MT1AP04731 61 aa5.91□□□□□ -1.46
PCOLCE-208ENST00000487172 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
PCOLCE-208ENST00000487172 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
PCOLCE-208ENST00000487172 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
PCOLCE-208ENST00000487172 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
PCOLCE-208ENST00000487172 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PCOLCE-208ENST00000487172 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
PCOLCE-208ENST00000487172 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
PCOLCE-208ENST00000487172 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
PCOLCE-208ENST00000487172 GPR98Q8WXG9 6306 aa5.61□□□□□ -1.51
PCOLCE-208ENST00000487172 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
PCOLCE-208ENST00000487172 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
PCOLCE-208ENST00000487172 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
PCOLCE-208ENST00000487172 MT3P25713 68 aa5.4□□□□□ -1.54
PCOLCE-208ENST00000487172 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
PCOLCE-208ENST00000487172 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
PCOLCE-208ENST00000487172 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
PCOLCE-208ENST00000487172 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
PCOLCE-208ENST00000487172 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
PCOLCE-208ENST00000487172 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
PCOLCE-208ENST00000487172 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
PCOLCE-208ENST00000487172 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
PCOLCE-208ENST00000487172 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
PCOLCE-208ENST00000487172 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
PCOLCE-208ENST00000487172 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
PCOLCE-208ENST00000487172 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
PCOLCE-208ENST00000487172 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
PCOLCE-208ENST00000487172 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
PCOLCE-208ENST00000487172 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
PCOLCE-208ENST00000487172 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
PCOLCE-208ENST00000487172 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
PCOLCE-208ENST00000487172 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
PCOLCE-208ENST00000487172 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
PCOLCE-208ENST00000487172 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
PCOLCE-208ENST00000487172 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
PCOLCE-208ENST00000487172 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
PCOLCE-208ENST00000487172 INE1O15225 51 aa3.89□□□□□ -1.79
PCOLCE-208ENST00000487172 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
PCOLCE-208ENST00000487172 PRM1P04553 51 aa3.66□□□□□ -1.82
PCOLCE-208ENST00000487172 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
PCOLCE-208ENST00000487172 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PCOLCE-208ENST00000487172 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PCOLCE-208ENST00000487172 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
PCOLCE-208ENST00000487172 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 162.3 ms