RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
SF3A3-206ENST00000487062 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
SF3A3-206ENST00000487062 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
SF3A3-206ENST00000487062 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
SF3A3-206ENST00000487062 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
SF3A3-206ENST00000487062 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
SF3A3-206ENST00000487062 USH2AO75445 5202 aa2.78□□□□□ -1.96
SF3A3-206ENST00000487062 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
SF3A3-206ENST00000487062 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
SF3A3-206ENST00000487062 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
SF3A3-206ENST00000487062 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SF3A3-206ENST00000487062 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
SF3A3-206ENST00000487062 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
SF3A3-206ENST00000487062 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
SF3A3-206ENST00000487062 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
SF3A3-206ENST00000487062 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
SF3A3-206ENST00000487062 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
SF3A3-206ENST00000487062 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SF3A3-206ENST00000487062 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
SF3A3-206ENST00000487062 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
SF3A3-206ENST00000487062 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
SF3A3-206ENST00000487062 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
SF3A3-206ENST00000487062 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SF3A3-206ENST00000487062 MT1EP04732 61 aa2.54□□□□□ -2
SF3A3-206ENST00000487062 MT1LQ93083 61 aa2.5□□□□□ -2.01
SF3A3-206ENST00000487062 KMT2DO14686 5537 aa2.5□□□□□ -2.01
SF3A3-206ENST00000487062 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
SF3A3-206ENST00000487062 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
SF3A3-206ENST00000487062 MT1GP13640 62 aa2.45□□□□□ -2.02
SF3A3-206ENST00000487062 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
SF3A3-206ENST00000487062 INE1O15225 51 aa2.44□□□□□ -2.02
SF3A3-206ENST00000487062 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SF3A3-206ENST00000487062 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
SF3A3-206ENST00000487062 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
SF3A3-206ENST00000487062 MT1MQ8N339 61 aa2.4□□□□□ -2.03
SF3A3-206ENST00000487062 SPRR2EP22531 72 aa2.37□□□□□ -2.03
SF3A3-206ENST00000487062 SPRR2BP35325 72 aa2.37□□□□□ -2.03
SF3A3-206ENST00000487062 SPRR2AP35326 72 aa2.37□□□□□ -2.03
SF3A3-206ENST00000487062 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
SF3A3-206ENST00000487062 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.04
SF3A3-206ENST00000487062 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
SF3A3-206ENST00000487062 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
SF3A3-206ENST00000487062 SPRR2DP22532 72 aa2.29□□□□□ -2.04
SF3A3-206ENST00000487062 NEBP20929 6669 aa2.26□□□□□ -2.05
SF3A3-206ENST00000487062 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
SF3A3-206ENST00000487062 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
SF3A3-206ENST00000487062 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
SF3A3-206ENST00000487062 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
SF3A3-206ENST00000487062 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
SF3A3-206ENST00000487062 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
SF3A3-206ENST00000487062 MT1AP04731 61 aa2.14□□□□□ -2.07
SF3A3-206ENST00000487062 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SF3A3-206ENST00000487062 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SF3A3-206ENST00000487062 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
SF3A3-206ENST00000487062 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
SF3A3-206ENST00000487062 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
SF3A3-206ENST00000487062 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
SF3A3-206ENST00000487062 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
SF3A3-206ENST00000487062 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
SF3A3-206ENST00000487062 MT4P47944 62 aa1.96□□□□□ -2.1
SF3A3-206ENST00000487062 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
SF3A3-206ENST00000487062 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
SF3A3-206ENST00000487062 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
SF3A3-206ENST00000487062 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
SF3A3-206ENST00000487062 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
SF3A3-206ENST00000487062 PRM1P04553 51 aa1.63□□□□□ -2.15
SF3A3-206ENST00000487062 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
SF3A3-206ENST00000487062 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
SF3A3-206ENST00000487062 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
SF3A3-206ENST00000487062 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
SF3A3-206ENST00000487062 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
SF3A3-206ENST00000487062 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
SF3A3-206ENST00000487062 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
SF3A3-206ENST00000487062 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SF3A3-206ENST00000487062 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
SF3A3-206ENST00000487062 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
SF3A3-206ENST00000487062 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SF3A3-206ENST00000487062 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms