RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SMARCAL1-212ENST00000486983 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
SMARCAL1-212ENST00000486983 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SMARCAL1-212ENST00000486983 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
SMARCAL1-212ENST00000486983 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
SMARCAL1-212ENST00000486983 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
SMARCAL1-212ENST00000486983 MT1HP80294 61 aa3.08□□□□□ -1.92
SMARCAL1-212ENST00000486983 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
SMARCAL1-212ENST00000486983 M0R2T5 61 aa3.03□□□□□ -1.92
SMARCAL1-212ENST00000486983 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
SMARCAL1-212ENST00000486983 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SMARCAL1-212ENST00000486983 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
SMARCAL1-212ENST00000486983 MT2AP02795 61 aa3.01□□□□□ -1.93
SMARCAL1-212ENST00000486983 TNP1P09430 55 aa3.01□□□□□ -1.93
SMARCAL1-212ENST00000486983 PLAC4Q8WY50 150 aa3□□□□□ -1.93
SMARCAL1-212ENST00000486983 MT1FP04733 61 aa2.99□□□□□ -1.93
SMARCAL1-212ENST00000486983 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
SMARCAL1-212ENST00000486983 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
SMARCAL1-212ENST00000486983 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
SMARCAL1-212ENST00000486983 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
SMARCAL1-212ENST00000486983 MT1BP07438 61 aa2.89□□□□□ -1.95
SMARCAL1-212ENST00000486983 MT1XP80297 61 aa2.85□□□□□ -1.95
SMARCAL1-212ENST00000486983 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
SMARCAL1-212ENST00000486983 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
SMARCAL1-212ENST00000486983 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
SMARCAL1-212ENST00000486983 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
SMARCAL1-212ENST00000486983 USH2AO75445 5202 aa2.77□□□□□ -1.97
SMARCAL1-212ENST00000486983 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
SMARCAL1-212ENST00000486983 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
SMARCAL1-212ENST00000486983 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
SMARCAL1-212ENST00000486983 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SMARCAL1-212ENST00000486983 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
SMARCAL1-212ENST00000486983 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
SMARCAL1-212ENST00000486983 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
SMARCAL1-212ENST00000486983 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
SMARCAL1-212ENST00000486983 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
SMARCAL1-212ENST00000486983 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
SMARCAL1-212ENST00000486983 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SMARCAL1-212ENST00000486983 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SMARCAL1-212ENST00000486983 MT1EP04732 61 aa2.49□□□□□ -2.01
SMARCAL1-212ENST00000486983 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
SMARCAL1-212ENST00000486983 KMT2DO14686 5537 aa2.48□□□□□ -2.01
SMARCAL1-212ENST00000486983 MT1LQ93083 61 aa2.47□□□□□ -2.01
SMARCAL1-212ENST00000486983 NEBP20929 6669 aa2.44□□□□□ -2.02
SMARCAL1-212ENST00000486983 INE1O15225 51 aa2.43□□□□□ -2.02
SMARCAL1-212ENST00000486983 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
SMARCAL1-212ENST00000486983 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
SMARCAL1-212ENST00000486983 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
SMARCAL1-212ENST00000486983 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
SMARCAL1-212ENST00000486983 SPRR2EP22531 72 aa2.37□□□□□ -2.03
SMARCAL1-212ENST00000486983 SPRR2BP35325 72 aa2.37□□□□□ -2.03
SMARCAL1-212ENST00000486983 SPRR2AP35326 72 aa2.37□□□□□ -2.03
SMARCAL1-212ENST00000486983 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
SMARCAL1-212ENST00000486983 MT1GP13640 62 aa2.35□□□□□ -2.03
SMARCAL1-212ENST00000486983 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
SMARCAL1-212ENST00000486983 MT1MQ8N339 61 aa2.32□□□□□ -2.04
SMARCAL1-212ENST00000486983 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
SMARCAL1-212ENST00000486983 SPRR2DP22532 72 aa2.28□□□□□ -2.04
SMARCAL1-212ENST00000486983 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SMARCAL1-212ENST00000486983 MT1AP04731 61 aa2.1□□□□□ -2.07
SMARCAL1-212ENST00000486983 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.08
SMARCAL1-212ENST00000486983 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
SMARCAL1-212ENST00000486983 MT4P47944 62 aa2.05□□□□□ -2.08
SMARCAL1-212ENST00000486983 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
SMARCAL1-212ENST00000486983 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
SMARCAL1-212ENST00000486983 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
SMARCAL1-212ENST00000486983 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
SMARCAL1-212ENST00000486983 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
SMARCAL1-212ENST00000486983 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
SMARCAL1-212ENST00000486983 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
SMARCAL1-212ENST00000486983 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
SMARCAL1-212ENST00000486983 PRM1P04553 51 aa1.76□□□□□ -2.13
SMARCAL1-212ENST00000486983 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
SMARCAL1-212ENST00000486983 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
SMARCAL1-212ENST00000486983 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
SMARCAL1-212ENST00000486983 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
SMARCAL1-212ENST00000486983 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SMARCAL1-212ENST00000486983 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 60.6 ms