RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-208ENST00000486585 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
PCMT1-208ENST00000486585 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
PCMT1-208ENST00000486585 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
PCMT1-208ENST00000486585 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
PCMT1-208ENST00000486585 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
PCMT1-208ENST00000486585 A0A1B0GU33 70 aa3.37□□□□□ -1.87
PCMT1-208ENST00000486585 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
PCMT1-208ENST00000486585 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
PCMT1-208ENST00000486585 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
PCMT1-208ENST00000486585 TNP1P09430 55 aa3.33□□□□□ -1.88
PCMT1-208ENST00000486585 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
PCMT1-208ENST00000486585 A0A1B0GV90 55 aa3.32□□□□□ -1.88
PCMT1-208ENST00000486585 MT3P25713 68 aa3.32□□□□□ -1.88
PCMT1-208ENST00000486585 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
PCMT1-208ENST00000486585 COA5Q86WW8 74 aa3.32□□□□□ -1.88
PCMT1-208ENST00000486585 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
PCMT1-208ENST00000486585 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
PCMT1-208ENST00000486585 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
PCMT1-208ENST00000486585 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
PCMT1-208ENST00000486585 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
PCMT1-208ENST00000486585 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
PCMT1-208ENST00000486585 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
PCMT1-208ENST00000486585 K7ERU9 68 aa3.21□□□□□ -1.9
PCMT1-208ENST00000486585 A0A1B0GU69 56 aa3.2□□□□□ -1.9
PCMT1-208ENST00000486585 A8MU10 97 aa3.18□□□□□ -1.9
PCMT1-208ENST00000486585 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
PCMT1-208ENST00000486585 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
PCMT1-208ENST00000486585 H7BZZ5 65 aa3.06□□□□□ -1.92
PCMT1-208ENST00000486585 COX7CP15954 63 aa3.06□□□□□ -1.92
PCMT1-208ENST00000486585 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
PCMT1-208ENST00000486585 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
PCMT1-208ENST00000486585 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
PCMT1-208ENST00000486585 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
PCMT1-208ENST00000486585 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
PCMT1-208ENST00000486585 MT1AP04731 61 aa2.96□□□□□ -1.94
PCMT1-208ENST00000486585 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
PCMT1-208ENST00000486585 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
PCMT1-208ENST00000486585 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PCMT1-208ENST00000486585 UQCR11O14957 56 aa2.94□□□□□ -1.94
PCMT1-208ENST00000486585 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
PCMT1-208ENST00000486585 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
PCMT1-208ENST00000486585 K7ERS5 55 aa2.9□□□□□ -1.95
PCMT1-208ENST00000486585 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
PCMT1-208ENST00000486585 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
PCMT1-208ENST00000486585 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
PCMT1-208ENST00000486585 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
PCMT1-208ENST00000486585 ANAPC13Q9BS18 74 aa2.82□□□□□ -1.96
PCMT1-208ENST00000486585 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
PCMT1-208ENST00000486585 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
PCMT1-208ENST00000486585 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
PCMT1-208ENST00000486585 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
PCMT1-208ENST00000486585 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
PCMT1-208ENST00000486585 RPS28P62857 69 aaKnown RBP2.72□□□□□ -1.97
PCMT1-208ENST00000486585 CCDC179H3BU77 68 aa2.71□□□□□ -1.98
PCMT1-208ENST00000486585 TMEM258P61165 79 aa2.66□□□□□ -1.98
PCMT1-208ENST00000486585 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
PCMT1-208ENST00000486585 V9GYY9 64 aa2.63□□□□□ -1.99
PCMT1-208ENST00000486585 Q1T7F1 81 aa2.62□□□□□ -1.99
PCMT1-208ENST00000486585 PSPHP1O15172 72 aa2.6□□□□□ -1.99
PCMT1-208ENST00000486585 ROMO1P60602 79 aa2.58□□□□□ -2
PCMT1-208ENST00000486585 A6NED7 52 aa2.53□□□□□ -2
PCMT1-208ENST00000486585 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
PCMT1-208ENST00000486585 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
PCMT1-208ENST00000486585 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
PCMT1-208ENST00000486585 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
PCMT1-208ENST00000486585 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PCMT1-208ENST00000486585 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
PCMT1-208ENST00000486585 BRK1Q8WUW1 75 aa2.23□□□□□ -2.05
PCMT1-208ENST00000486585 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
PCMT1-208ENST00000486585 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
PCMT1-208ENST00000486585 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
PCMT1-208ENST00000486585 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
PCMT1-208ENST00000486585 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
PCMT1-208ENST00000486585 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
PCMT1-208ENST00000486585 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
PCMT1-208ENST00000486585 INE1O15225 51 aa1.59□□□□□ -2.15
PCMT1-208ENST00000486585 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
PCMT1-208ENST00000486585 PRM1P04553 51 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms