RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
USP41-204ENST00000486536 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
USP41-204ENST00000486536 A6NN06 94 aa2.62□□□□□ -1.99
USP41-204ENST00000486536 A0A0D9SG42 100 aa2.61□□□□□ -1.99
USP41-204ENST00000486536 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
USP41-204ENST00000486536 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -2
USP41-204ENST00000486536 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -2
USP41-204ENST00000486536 KRTAP12-1P59990 96 aa2.58□□□□□ -2
USP41-204ENST00000486536 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
USP41-204ENST00000486536 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
USP41-204ENST00000486536 PLAC4Q8WY50 150 aa2.54□□□□□ -2
USP41-204ENST00000486536 MT1BP07438 61 aa2.52□□□□□ -2.01
USP41-204ENST00000486536 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
USP41-204ENST00000486536 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
USP41-204ENST00000486536 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
USP41-204ENST00000486536 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
USP41-204ENST00000486536 ROMO1P60602 79 aa2.46□□□□□ -2.02
USP41-204ENST00000486536 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
USP41-204ENST00000486536 NEBP20929 6669 aa2.45□□□□□ -2.02
USP41-204ENST00000486536 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
USP41-204ENST00000486536 MT1XP80297 61 aa2.43□□□□□ -2.02
USP41-204ENST00000486536 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
USP41-204ENST00000486536 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
USP41-204ENST00000486536 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
USP41-204ENST00000486536 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
USP41-204ENST00000486536 TNP1P09430 55 aa2.39□□□□□ -2.03
USP41-204ENST00000486536 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
USP41-204ENST00000486536 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
USP41-204ENST00000486536 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
USP41-204ENST00000486536 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
USP41-204ENST00000486536 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
USP41-204ENST00000486536 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
USP41-204ENST00000486536 KMT2DO14686 5537 aa2.28□□□□□ -2.04
USP41-204ENST00000486536 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
USP41-204ENST00000486536 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
USP41-204ENST00000486536 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
USP41-204ENST00000486536 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
USP41-204ENST00000486536 SPRR2EP22531 72 aa2.21□□□□□ -2.06
USP41-204ENST00000486536 SPRR2BP35325 72 aa2.21□□□□□ -2.06
USP41-204ENST00000486536 SPRR2AP35326 72 aa2.21□□□□□ -2.06
USP41-204ENST00000486536 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
USP41-204ENST00000486536 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
USP41-204ENST00000486536 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
USP41-204ENST00000486536 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
USP41-204ENST00000486536 MT1EP04732 61 aa2.14□□□□□ -2.07
USP41-204ENST00000486536 SPRR2DP22532 72 aa2.13□□□□□ -2.07
USP41-204ENST00000486536 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
USP41-204ENST00000486536 MT1LQ93083 61 aa2.09□□□□□ -2.07
USP41-204ENST00000486536 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
USP41-204ENST00000486536 MT1GP13640 62 aa2.06□□□□□ -2.08
USP41-204ENST00000486536 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
USP41-204ENST00000486536 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
USP41-204ENST00000486536 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
USP41-204ENST00000486536 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
USP41-204ENST00000486536 MT1MQ8N339 61 aa2.01□□□□□ -2.09
USP41-204ENST00000486536 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
USP41-204ENST00000486536 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
USP41-204ENST00000486536 INE1O15225 51 aa1.95□□□□□ -2.1
USP41-204ENST00000486536 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
USP41-204ENST00000486536 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
USP41-204ENST00000486536 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
USP41-204ENST00000486536 MT4P47944 62 aa1.9□□□□□ -2.11
USP41-204ENST00000486536 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
USP41-204ENST00000486536 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
USP41-204ENST00000486536 MT1AP04731 61 aa1.79□□□□□ -2.12
USP41-204ENST00000486536 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
USP41-204ENST00000486536 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
USP41-204ENST00000486536 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
USP41-204ENST00000486536 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
USP41-204ENST00000486536 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
USP41-204ENST00000486536 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
USP41-204ENST00000486536 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
USP41-204ENST00000486536 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
USP41-204ENST00000486536 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
USP41-204ENST00000486536 PRM1P04553 51 aa1.26□□□□□ -2.21
USP41-204ENST00000486536 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
USP41-204ENST00000486536 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
USP41-204ENST00000486536 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms