RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 USH2AO75445 5202 aa4.62□□□□□ -1.67
PKP4-213ENST00000486254 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
PKP4-213ENST00000486254 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
PKP4-213ENST00000486254 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
PKP4-213ENST00000486254 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
PKP4-213ENST00000486254 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
PKP4-213ENST00000486254 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
PKP4-213ENST00000486254 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
PKP4-213ENST00000486254 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
PKP4-213ENST00000486254 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
PKP4-213ENST00000486254 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
PKP4-213ENST00000486254 MT1EP04732 61 aa4.3□□□□□ -1.72
PKP4-213ENST00000486254 KMT2DO14686 5537 aa4.26□□□□□ -1.73
PKP4-213ENST00000486254 MT1LQ93083 61 aa4.24□□□□□ -1.73
PKP4-213ENST00000486254 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
PKP4-213ENST00000486254 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.74
PKP4-213ENST00000486254 MT1GP13640 62 aa4.1□□□□□ -1.75
PKP4-213ENST00000486254 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
PKP4-213ENST00000486254 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
PKP4-213ENST00000486254 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
PKP4-213ENST00000486254 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
PKP4-213ENST00000486254 MT1MQ8N339 61 aa4.03□□□□□ -1.76
PKP4-213ENST00000486254 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
PKP4-213ENST00000486254 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PKP4-213ENST00000486254 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
PKP4-213ENST00000486254 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
PKP4-213ENST00000486254 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
PKP4-213ENST00000486254 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
PKP4-213ENST00000486254 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
PKP4-213ENST00000486254 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
PKP4-213ENST00000486254 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
PKP4-213ENST00000486254 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
PKP4-213ENST00000486254 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
PKP4-213ENST00000486254 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
PKP4-213ENST00000486254 INE1O15225 51 aa3.8□□□□□ -1.8
PKP4-213ENST00000486254 SPRR2EP22531 72 aa3.76□□□□□ -1.81
PKP4-213ENST00000486254 SPRR2BP35325 72 aa3.76□□□□□ -1.81
PKP4-213ENST00000486254 SPRR2AP35326 72 aa3.76□□□□□ -1.81
PKP4-213ENST00000486254 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
PKP4-213ENST00000486254 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
PKP4-213ENST00000486254 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
PKP4-213ENST00000486254 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
PKP4-213ENST00000486254 MT1AP04731 61 aa3.63□□□□□ -1.83
PKP4-213ENST00000486254 SPRR2DP22532 72 aa3.63□□□□□ -1.83
PKP4-213ENST00000486254 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
PKP4-213ENST00000486254 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
PKP4-213ENST00000486254 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
PKP4-213ENST00000486254 NEBP20929 6669 aa3.45□□□□□ -1.86
PKP4-213ENST00000486254 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PKP4-213ENST00000486254 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
PKP4-213ENST00000486254 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
PKP4-213ENST00000486254 MT3P25713 68 aa3.27□□□□□ -1.89
PKP4-213ENST00000486254 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
PKP4-213ENST00000486254 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
PKP4-213ENST00000486254 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.89
PKP4-213ENST00000486254 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.89
PKP4-213ENST00000486254 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
PKP4-213ENST00000486254 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
PKP4-213ENST00000486254 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
PKP4-213ENST00000486254 MT4P47944 62 aa3.08□□□□□ -1.92
PKP4-213ENST00000486254 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
PKP4-213ENST00000486254 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
PKP4-213ENST00000486254 PRM1P04553 51 aa2.84□□□□□ -1.95
PKP4-213ENST00000486254 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
PKP4-213ENST00000486254 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
PKP4-213ENST00000486254 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
PKP4-213ENST00000486254 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
PKP4-213ENST00000486254 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
PKP4-213ENST00000486254 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
PKP4-213ENST00000486254 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
PKP4-213ENST00000486254 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
PKP4-213ENST00000486254 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
PKP4-213ENST00000486254 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
PKP4-213ENST00000486254 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PKP4-213ENST00000486254 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PKP4-213ENST00000486254 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
PKP4-213ENST00000486254 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
PKP4-213ENST00000486254 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms