RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SPINK7P58062 85 aa2.36□□□□□ -2.03
RTN4-214ENST00000486085 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
RTN4-214ENST00000486085 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
RTN4-214ENST00000486085 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
RTN4-214ENST00000486085 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.03
RTN4-214ENST00000486085 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
RTN4-214ENST00000486085 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
RTN4-214ENST00000486085 COX6B2Q6YFQ2 88 aa2.28□□□□□ -2.04
RTN4-214ENST00000486085 COA5Q86WW8 74 aa2.26□□□□□ -2.05
RTN4-214ENST00000486085 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
RTN4-214ENST00000486085 MT1HP80294 61 aa2.23□□□□□ -2.05
RTN4-214ENST00000486085 A0A1B0GU69 56 aa2.21□□□□□ -2.06
RTN4-214ENST00000486085 INE1O15225 51 aa2.21□□□□□ -2.06
RTN4-214ENST00000486085 H0YAA0 97 aa2.19□□□□□ -2.06
RTN4-214ENST00000486085 ACYP2P14621 99 aa2.19□□□□□ -2.06
RTN4-214ENST00000486085 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
RTN4-214ENST00000486085 S4R3F8 94 aa2.17□□□□□ -2.06
RTN4-214ENST00000486085 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
RTN4-214ENST00000486085 MT2AP02795 61 aa2.12□□□□□ -2.07
RTN4-214ENST00000486085 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
RTN4-214ENST00000486085 M0R2T5 61 aa2.11□□□□□ -2.07
RTN4-214ENST00000486085 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
RTN4-214ENST00000486085 MT1FP04733 61 aa2.09□□□□□ -2.07
RTN4-214ENST00000486085 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
RTN4-214ENST00000486085 M0QZ58 72 aa2.05□□□□□ -2.08
RTN4-214ENST00000486085 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
RTN4-214ENST00000486085 USH2AO75445 5202 aa2.01□□□□□ -2.09
RTN4-214ENST00000486085 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
RTN4-214ENST00000486085 MT1BP07438 61 aa1.98□□□□□ -2.09
RTN4-214ENST00000486085 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
RTN4-214ENST00000486085 FSIP2Q5CZC0 6907 aa1.94□□□□□ -2.1
RTN4-214ENST00000486085 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
RTN4-214ENST00000486085 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
RTN4-214ENST00000486085 MT1XP80297 61 aa1.89□□□□□ -2.11
RTN4-214ENST00000486085 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
RTN4-214ENST00000486085 A0A0D9SG42 100 aa1.84□□□□□ -2.11
RTN4-214ENST00000486085 C10orf95Q9H7T3 257 aa1.83□□□□□ -2.12
RTN4-214ENST00000486085 TNP1P09430 55 aa1.77□□□□□ -2.13
RTN4-214ENST00000486085 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
RTN4-214ENST00000486085 KMT2DO14686 5537 aa1.76□□□□□ -2.13
RTN4-214ENST00000486085 KRTAP8-1Q8IUC2 63 aa1.73□□□□□ -2.13
RTN4-214ENST00000486085 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
RTN4-214ENST00000486085 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
RTN4-214ENST00000486085 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
RTN4-214ENST00000486085 NEBP20929 6669 aa1.69□□□□□ -2.14
RTN4-214ENST00000486085 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
RTN4-214ENST00000486085 MT1EP04732 61 aa1.68□□□□□ -2.14
RTN4-214ENST00000486085 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
RTN4-214ENST00000486085 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
RTN4-214ENST00000486085 MT1GP13640 62 aa1.63□□□□□ -2.15
RTN4-214ENST00000486085 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
RTN4-214ENST00000486085 MT1LQ93083 61 aa1.62□□□□□ -2.15
RTN4-214ENST00000486085 SPRR2EP22531 72 aa1.59□□□□□ -2.15
RTN4-214ENST00000486085 SPRR2BP35325 72 aa1.59□□□□□ -2.15
RTN4-214ENST00000486085 SPRR2AP35326 72 aa1.59□□□□□ -2.15
RTN4-214ENST00000486085 MT1MQ8N339 61 aa1.57□□□□□ -2.16
RTN4-214ENST00000486085 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
RTN4-214ENST00000486085 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
RTN4-214ENST00000486085 SPRR2DP22532 72 aa1.54□□□□□ -2.16
RTN4-214ENST00000486085 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
RTN4-214ENST00000486085 KRTAP20-1Q3LI63 56 aa1.51□□□□□ -2.17
RTN4-214ENST00000486085 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
RTN4-214ENST00000486085 MT1AP04731 61 aa1.4□□□□□ -2.19
RTN4-214ENST00000486085 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
RTN4-214ENST00000486085 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
RTN4-214ENST00000486085 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
RTN4-214ENST00000486085 MT4P47944 62 aa1.29□□□□□ -2.2
RTN4-214ENST00000486085 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
RTN4-214ENST00000486085 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
RTN4-214ENST00000486085 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
RTN4-214ENST00000486085 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
RTN4-214ENST00000486085 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
RTN4-214ENST00000486085 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
RTN4-214ENST00000486085 PRM1P04553 51 aa1.08□□□□□ -2.24
RTN4-214ENST00000486085 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
RTN4-214ENST00000486085 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
RTN4-214ENST00000486085 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
RTN4-214ENST00000486085 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 139.8 ms