RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 DYNC1H1Q14204 4646 aaKnown RBP0.85□□□□□ -2.27
PHC3-211ENST00000486042 RPL39P5Q59GN2 51 aa0.85□□□□□ -2.27
PHC3-211ENST00000486042 DNAH6Q9C0G6 4158 aa0.84□□□□□ -2.27
PHC3-211ENST00000486042 SPINK1P00995 79 aa0.84□□□□□ -2.27
PHC3-211ENST00000486042 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
PHC3-211ENST00000486042 DNAH17Q9UFH2 4485 aa0.83□□□□□ -2.28
PHC3-211ENST00000486042 A0A096LPF7 62 aa0.82□□□□□ -2.28
PHC3-211ENST00000486042 M0R2T5 61 aa0.82□□□□□ -2.28
PHC3-211ENST00000486042 HTN1P15515 57 aa0.82□□□□□ -2.28
PHC3-211ENST00000486042 FAT1Q14517 4588 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 LPAP08519 4548 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 FAT3Q8TDW7 4589 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 DEFB104AQ8WTQ1 72 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
PHC3-211ENST00000486042 LRP1Q07954 4544 aaKnown RBP0.81□□□□□ -2.28
PHC3-211ENST00000486042 LRP1BQ9NZR2 4599 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 LRP2P98164 4655 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 TNP1P09430 55 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 DEFB1P60022 68 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 DNAH5Q8TE73 4624 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 MUC2Q02817 5179 aa0.8□□□□□ -2.28
PHC3-211ENST00000486042 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
PHC3-211ENST00000486042 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
PHC3-211ENST00000486042 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
PHC3-211ENST00000486042 SPART-AS1P0CW21 52 aa0.76□□□□□ -2.29
PHC3-211ENST00000486042 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
PHC3-211ENST00000486042 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
PHC3-211ENST00000486042 KRTAP8-1Q8IUC2 63 aa0.75□□□□□ -2.29
PHC3-211ENST00000486042 RHPN1-AS1Q9BWJ2 59 aa0.75□□□□□ -2.29
PHC3-211ENST00000486042 PRM1P04553 51 aa0.72□□□□□ -2.29
PHC3-211ENST00000486042 KRTAP20-1Q3LI63 56 aa0.71□□□□□ -2.3
PHC3-211ENST00000486042 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
PHC3-211ENST00000486042 LINC01556Q5JQF7 62 aa0.7□□□□□ -2.3
PHC3-211ENST00000486042 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
PHC3-211ENST00000486042 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
PHC3-211ENST00000486042 USH2AO75445 5202 aa0.68□□□□□ -2.3
PHC3-211ENST00000486042 A0A096LNI7 61 aa0.67□□□□□ -2.3
PHC3-211ENST00000486042 MT1HP80294 61 aa0.67□□□□□ -2.3
PHC3-211ENST00000486042 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
PHC3-211ENST00000486042 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
PHC3-211ENST00000486042 MT1AP04731 61 aa0.66□□□□□ -2.3
PHC3-211ENST00000486042 SPRR2DP22532 72 aa0.66□□□□□ -2.3
PHC3-211ENST00000486042 SPRR2BP35325 72 aa0.66□□□□□ -2.3
PHC3-211ENST00000486042 MUC17Q685J3 4493 aa0.66□□□□□ -2.3
PHC3-211ENST00000486042 NEBP20929 6669 aa0.65□□□□□ -2.31
PHC3-211ENST00000486042 H3BNG1 76 aa0.65□□□□□ -2.31
PHC3-211ENST00000486042 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
PHC3-211ENST00000486042 SPRR2EP22531 72 aa0.62□□□□□ -2.31
PHC3-211ENST00000486042 SPRR2AP35326 72 aa0.62□□□□□ -2.31
PHC3-211ENST00000486042 MDN1Q9NU22 5596 aa0.62□□□□□ -2.31
PHC3-211ENST00000486042 KMT2DO14686 5537 aa0.62□□□□□ -2.31
PHC3-211ENST00000486042 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
PHC3-211ENST00000486042 RPS29P62273 56 aaKnown RBP0.61□□□□□ -2.31
PHC3-211ENST00000486042 MT2AP02795 61 aa0.6□□□□□ -2.31
PHC3-211ENST00000486042 MT1FP04733 61 aa0.6□□□□□ -2.31
PHC3-211ENST00000486042 SPRR2FQ96RM1 72 aa0.6□□□□□ -2.31
PHC3-211ENST00000486042 KRTAP19-2Q3LHN2 52 aa0.59□□□□□ -2.31
PHC3-211ENST00000486042 KRTAP19-6Q3LI70 58 aa0.59□□□□□ -2.31
PHC3-211ENST00000486042 MT4P47944 62 aa0.58□□□□□ -2.32
PHC3-211ENST00000486042 DSTQ03001 7570 aaKnown RBP0.55□□□□□ -2.32
PHC3-211ENST00000486042 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
PHC3-211ENST00000486042 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
PHC3-211ENST00000486042 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
PHC3-211ENST00000486042 MT1BP07438 61 aa0.49□□□□□ -2.33
PHC3-211ENST00000486042 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
PHC3-211ENST00000486042 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
PHC3-211ENST00000486042 MT1EP04732 61 aa0.46□□□□□ -2.34
PHC3-211ENST00000486042 MT1XP80297 61 aa0.43□□□□□ -2.34
PHC3-211ENST00000486042 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
PHC3-211ENST00000486042 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
PHC3-211ENST00000486042 MT1GP13640 62 aa0.4□□□□□ -2.35
PHC3-211ENST00000486042 MT1LQ93083 61 aa0.4□□□□□ -2.35
PHC3-211ENST00000486042 SPRR2GQ9BYE4 73 aa0.4□□□□□ -2.35
PHC3-211ENST00000486042 MT1MQ8N339 61 aa0.39□□□□□ -2.35
PHC3-211ENST00000486042 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
PHC3-211ENST00000486042 KRTAP19-7Q3SYF9 63 aa0.37□□□□□ -2.35
PHC3-211ENST00000486042 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 238.2 ms