RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
PHC3-211ENST00000486042 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
PHC3-211ENST00000486042 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
PHC3-211ENST00000486042 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
PHC3-211ENST00000486042 FOXD1Q16676 465 aa22.23■■□□□ 1.15
PHC3-211ENST00000486042 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
PHC3-211ENST00000486042 MSH5O43196 834 aa21■□□□□ 0.95
PHC3-211ENST00000486042 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
PHC3-211ENST00000486042 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
PHC3-211ENST00000486042 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
PHC3-211ENST00000486042 ADRA2BP18089 450 aa20.41■□□□□ 0.86
PHC3-211ENST00000486042 DMRT2Q9Y5R5 561 aa18.86■□□□□ 0.61
PHC3-211ENST00000486042 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
PHC3-211ENST00000486042 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
PHC3-211ENST00000486042 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
PHC3-211ENST00000486042 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
PHC3-211ENST00000486042 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
PHC3-211ENST00000486042 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
PHC3-211ENST00000486042 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
PHC3-211ENST00000486042 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
PHC3-211ENST00000486042 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
PHC3-211ENST00000486042 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
PHC3-211ENST00000486042 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
PHC3-211ENST00000486042 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
PHC3-211ENST00000486042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.348e-10■■■■■ 27.1
PHC3-211ENST00000486042 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
PHC3-211ENST00000486042 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
PHC3-211ENST00000486042 DSG3P32926 999 aa16.6■□□□□ 0.25
PHC3-211ENST00000486042 CAPN15O75808 1086 aa16.59■□□□□ 0.25
PHC3-211ENST00000486042 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
PHC3-211ENST00000486042 POTEHQ6S545 545 aa16.42■□□□□ 0.22
PHC3-211ENST00000486042 KCNA4P22459 653 aa16.39■□□□□ 0.21
PHC3-211ENST00000486042 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
PHC3-211ENST00000486042 APLP2Q06481 763 aa16.35■□□□□ 0.21
PHC3-211ENST00000486042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
PHC3-211ENST00000486042 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
PHC3-211ENST00000486042 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
PHC3-211ENST00000486042 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
PHC3-211ENST00000486042 ABCB7O75027 752 aa16.13■□□□□ 0.17
PHC3-211ENST00000486042 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
PHC3-211ENST00000486042 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
PHC3-211ENST00000486042 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
PHC3-211ENST00000486042 POLA2Q14181 598 aa15.75■□□□□ 0.11
PHC3-211ENST00000486042 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
PHC3-211ENST00000486042 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
PHC3-211ENST00000486042 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
PHC3-211ENST00000486042 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
PHC3-211ENST00000486042 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
PHC3-211ENST00000486042 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
PHC3-211ENST00000486042 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
PHC3-211ENST00000486042 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
PHC3-211ENST00000486042 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
PHC3-211ENST00000486042 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
PHC3-211ENST00000486042 PITPNM1O00562 1244 aa15.08■□□□□ 0
PHC3-211ENST00000486042 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
PHC3-211ENST00000486042 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
PHC3-211ENST00000486042 ZBTB22O15209 634 aa15.03■□□□□ -0
PHC3-211ENST00000486042 HAX1O00165 279 aa15.01□□□□□ -0.01
PHC3-211ENST00000486042 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
PHC3-211ENST00000486042 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
PHC3-211ENST00000486042 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
PHC3-211ENST00000486042 FBLN2P98095 1184 aa14.91□□□□□ -0.02
PHC3-211ENST00000486042 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
PHC3-211ENST00000486042 EVX2Q03828 476 aa14.75□□□□□ -0.05
PHC3-211ENST00000486042 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
PHC3-211ENST00000486042 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
PHC3-211ENST00000486042 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
PHC3-211ENST00000486042 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
PHC3-211ENST00000486042 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
PHC3-211ENST00000486042 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
PHC3-211ENST00000486042 GABBR2O75899 941 aa14.45□□□□□ -0.1
PHC3-211ENST00000486042 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
PHC3-211ENST00000486042 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
PHC3-211ENST00000486042 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
PHC3-211ENST00000486042 LHX8Q68G74 356 aa14.29□□□□□ -0.12
PHC3-211ENST00000486042 CLCN6P51797 869 aa14.23□□□□□ -0.13
PHC3-211ENST00000486042 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
PHC3-211ENST00000486042 CD44P16070 742 aaKnown RBP14.22□□□□□ -0.13
PHC3-211ENST00000486042 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
PHC3-211ENST00000486042 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
PHC3-211ENST00000486042 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
PHC3-211ENST00000486042 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
PHC3-211ENST00000486042 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
PHC3-211ENST00000486042 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
PHC3-211ENST00000486042 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
PHC3-211ENST00000486042 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
PHC3-211ENST00000486042 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
PHC3-211ENST00000486042 GALR2O43603 387 aaPredicted RBP13.81□□□□□ -0.2
PHC3-211ENST00000486042 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
PHC3-211ENST00000486042 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
PHC3-211ENST00000486042 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
PHC3-211ENST00000486042 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
PHC3-211ENST00000486042 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
PHC3-211ENST00000486042 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
PHC3-211ENST00000486042 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
PHC3-211ENST00000486042 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
PHC3-211ENST00000486042 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
PHC3-211ENST00000486042 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
PHC3-211ENST00000486042 C7P10643 843 aa13.51□□□□□ -0.25
PHC3-211ENST00000486042 ATMINO43313 823 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms