RNA–Protein interactions for RNA: ENST00000485439.5

RPL35A-208, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-208ENST00000485439 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
RPL35A-208ENST00000485439 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
RPL35A-208ENST00000485439 A0A1B0GU69 56 aa2.85□□□□□ -1.95
RPL35A-208ENST00000485439 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
RPL35A-208ENST00000485439 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
RPL35A-208ENST00000485439 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
RPL35A-208ENST00000485439 A8MU10 97 aa2.81□□□□□ -1.96
RPL35A-208ENST00000485439 MT1GP13640 62 aa2.81□□□□□ -1.96
RPL35A-208ENST00000485439 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
RPL35A-208ENST00000485439 ANAPC13Q9BS18 74 aa2.81□□□□□ -1.96
RPL35A-208ENST00000485439 TNP1P09430 55 aa2.77□□□□□ -1.97
RPL35A-208ENST00000485439 ATP5EP56381 51 aaPredicted RBP2.77□□□□□ -1.97
RPL35A-208ENST00000485439 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
RPL35A-208ENST00000485439 MT1MQ8N339 61 aa2.77□□□□□ -1.97
RPL35A-208ENST00000485439 MT1LQ93083 61 aa2.77□□□□□ -1.97
RPL35A-208ENST00000485439 PRR15LQ9BU68 103 aa2.77□□□□□ -1.97
RPL35A-208ENST00000485439 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
RPL35A-208ENST00000485439 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
RPL35A-208ENST00000485439 PSPHP1O15172 72 aa2.73□□□□□ -1.97
RPL35A-208ENST00000485439 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
RPL35A-208ENST00000485439 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
RPL35A-208ENST00000485439 MT4P47944 62 aa2.7□□□□□ -1.98
RPL35A-208ENST00000485439 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
RPL35A-208ENST00000485439 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
RPL35A-208ENST00000485439 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
RPL35A-208ENST00000485439 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
RPL35A-208ENST00000485439 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
RPL35A-208ENST00000485439 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
RPL35A-208ENST00000485439 TMEM258P61165 79 aa2.66□□□□□ -1.98
RPL35A-208ENST00000485439 UQCR11O14957 56 aa2.65□□□□□ -1.99
RPL35A-208ENST00000485439 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
RPL35A-208ENST00000485439 MIR22HGQ0VDD5 57 aa2.59□□□□□ -1.99
RPL35A-208ENST00000485439 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
RPL35A-208ENST00000485439 K7ERS5 55 aa2.56□□□□□ -2
RPL35A-208ENST00000485439 LUZP6Q538Z0 58 aa2.56□□□□□ -2
RPL35A-208ENST00000485439 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
RPL35A-208ENST00000485439 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
RPL35A-208ENST00000485439 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
RPL35A-208ENST00000485439 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
RPL35A-208ENST00000485439 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
RPL35A-208ENST00000485439 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
RPL35A-208ENST00000485439 Q1T7F1 81 aa2.49□□□□□ -2.01
RPL35A-208ENST00000485439 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
RPL35A-208ENST00000485439 A6NED7 52 aa2.44□□□□□ -2.02
RPL35A-208ENST00000485439 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
RPL35A-208ENST00000485439 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
RPL35A-208ENST00000485439 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
RPL35A-208ENST00000485439 MT1AP04731 61 aa2.37□□□□□ -2.03
RPL35A-208ENST00000485439 ROMO1P60602 79 aa2.37□□□□□ -2.03
RPL35A-208ENST00000485439 RPS28P62857 69 aaKnown RBP2.35□□□□□ -2.03
RPL35A-208ENST00000485439 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
RPL35A-208ENST00000485439 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
RPL35A-208ENST00000485439 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
RPL35A-208ENST00000485439 MT3P25713 68 aa2.33□□□□□ -2.04
RPL35A-208ENST00000485439 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
RPL35A-208ENST00000485439 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
RPL35A-208ENST00000485439 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
RPL35A-208ENST00000485439 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
RPL35A-208ENST00000485439 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
RPL35A-208ENST00000485439 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
RPL35A-208ENST00000485439 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
RPL35A-208ENST00000485439 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
RPL35A-208ENST00000485439 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
RPL35A-208ENST00000485439 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
RPL35A-208ENST00000485439 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
RPL35A-208ENST00000485439 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
RPL35A-208ENST00000485439 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
RPL35A-208ENST00000485439 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
RPL35A-208ENST00000485439 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
RPL35A-208ENST00000485439 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
RPL35A-208ENST00000485439 INE1O15225 51 aa1.75□□□□□ -2.13
RPL35A-208ENST00000485439 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
RPL35A-208ENST00000485439 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
RPL35A-208ENST00000485439 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
RPL35A-208ENST00000485439 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
RPL35A-208ENST00000485439 PRM1P04553 51 aa1.22□□□□□ -2.21
RPL35A-208ENST00000485439 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
RPL35A-208ENST00000485439 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 144.3 ms