RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.31
ERCC2-205ENST00000485403 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
ERCC2-205ENST00000485403 MT1EP04732 61 aa6.81□□□□□ -1.32
ERCC2-205ENST00000485403 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
ERCC2-205ENST00000485403 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.33
ERCC2-205ENST00000485403 SPRR2DP22532 72 aa6.7□□□□□ -1.34
ERCC2-205ENST00000485403 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
ERCC2-205ENST00000485403 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
ERCC2-205ENST00000485403 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
ERCC2-205ENST00000485403 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
ERCC2-205ENST00000485403 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
ERCC2-205ENST00000485403 MT1LQ93083 61 aa6.57□□□□□ -1.36
ERCC2-205ENST00000485403 MT1GP13640 62 aa6.55□□□□□ -1.36
ERCC2-205ENST00000485403 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
ERCC2-205ENST00000485403 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.37
ERCC2-205ENST00000485403 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.37
ERCC2-205ENST00000485403 MT1MQ8N339 61 aa6.45□□□□□ -1.38
ERCC2-205ENST00000485403 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
ERCC2-205ENST00000485403 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
ERCC2-205ENST00000485403 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
ERCC2-205ENST00000485403 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
ERCC2-205ENST00000485403 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
ERCC2-205ENST00000485403 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
ERCC2-205ENST00000485403 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
ERCC2-205ENST00000485403 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
ERCC2-205ENST00000485403 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
ERCC2-205ENST00000485403 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
ERCC2-205ENST00000485403 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
ERCC2-205ENST00000485403 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
ERCC2-205ENST00000485403 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
ERCC2-205ENST00000485403 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
ERCC2-205ENST00000485403 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
ERCC2-205ENST00000485403 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
ERCC2-205ENST00000485403 MT4P47944 62 aa5.82□□□□□ -1.48
ERCC2-205ENST00000485403 H3BS24 57 aa5.74□□□□□ -1.49
ERCC2-205ENST00000485403 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
ERCC2-205ENST00000485403 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
ERCC2-205ENST00000485403 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
ERCC2-205ENST00000485403 MT1AP04731 61 aa5.6□□□□□ -1.51
ERCC2-205ENST00000485403 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
ERCC2-205ENST00000485403 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
ERCC2-205ENST00000485403 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
ERCC2-205ENST00000485403 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
ERCC2-205ENST00000485403 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
ERCC2-205ENST00000485403 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
ERCC2-205ENST00000485403 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
ERCC2-205ENST00000485403 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
ERCC2-205ENST00000485403 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
ERCC2-205ENST00000485403 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
ERCC2-205ENST00000485403 INE1O15225 51 aa5.16□□□□□ -1.58
ERCC2-205ENST00000485403 MT3P25713 68 aa5.09□□□□□ -1.59
ERCC2-205ENST00000485403 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
ERCC2-205ENST00000485403 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
ERCC2-205ENST00000485403 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
ERCC2-205ENST00000485403 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
ERCC2-205ENST00000485403 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
ERCC2-205ENST00000485403 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
ERCC2-205ENST00000485403 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
ERCC2-205ENST00000485403 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
ERCC2-205ENST00000485403 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
ERCC2-205ENST00000485403 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
ERCC2-205ENST00000485403 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
ERCC2-205ENST00000485403 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
ERCC2-205ENST00000485403 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
ERCC2-205ENST00000485403 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
ERCC2-205ENST00000485403 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
ERCC2-205ENST00000485403 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
ERCC2-205ENST00000485403 PRM1P04553 51 aa4□□□□□ -1.77
ERCC2-205ENST00000485403 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
ERCC2-205ENST00000485403 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
ERCC2-205ENST00000485403 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
ERCC2-205ENST00000485403 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
ERCC2-205ENST00000485403 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
ERCC2-205ENST00000485403 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
ERCC2-205ENST00000485403 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ERCC2-205ENST00000485403 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
ERCC2-205ENST00000485403 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 101.5 ms