RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
KPNA1-208ENST00000485027 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
KPNA1-208ENST00000485027 KRTAP19-2Q3LHN2 52 aa2.41□□□□□ -2.02
KPNA1-208ENST00000485027 M0QZ58 72 aa2.39□□□□□ -2.03
KPNA1-208ENST00000485027 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
KPNA1-208ENST00000485027 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
KPNA1-208ENST00000485027 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
KPNA1-208ENST00000485027 MT1HP80294 61 aa2.35□□□□□ -2.03
KPNA1-208ENST00000485027 SSPOA2VEC9 5147 aa2.34□□□□□ -2.03
KPNA1-208ENST00000485027 FLGP20930 4061 aaPredicted RBP2.33□□□□□ -2.04
KPNA1-208ENST00000485027 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
KPNA1-208ENST00000485027 M0R2T5 61 aa2.25□□□□□ -2.05
KPNA1-208ENST00000485027 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
KPNA1-208ENST00000485027 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
KPNA1-208ENST00000485027 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
KPNA1-208ENST00000485027 USH2AO75445 5202 aa2.23□□□□□ -2.05
KPNA1-208ENST00000485027 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
KPNA1-208ENST00000485027 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
KPNA1-208ENST00000485027 NEBP20929 6669 aa2.22□□□□□ -2.05
KPNA1-208ENST00000485027 MT2AP02795 61 aa2.2□□□□□ -2.06
KPNA1-208ENST00000485027 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
KPNA1-208ENST00000485027 MT1FP04733 61 aa2.19□□□□□ -2.06
KPNA1-208ENST00000485027 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
KPNA1-208ENST00000485027 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
KPNA1-208ENST00000485027 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
KPNA1-208ENST00000485027 TNP1P09430 55 aa2.12□□□□□ -2.07
KPNA1-208ENST00000485027 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
KPNA1-208ENST00000485027 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
KPNA1-208ENST00000485027 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
KPNA1-208ENST00000485027 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
KPNA1-208ENST00000485027 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.09
KPNA1-208ENST00000485027 KMT2DO14686 5537 aa2.02□□□□□ -2.09
KPNA1-208ENST00000485027 MT1BP07438 61 aa2.02□□□□□ -2.09
KPNA1-208ENST00000485027 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
KPNA1-208ENST00000485027 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
KPNA1-208ENST00000485027 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
KPNA1-208ENST00000485027 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
KPNA1-208ENST00000485027 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
KPNA1-208ENST00000485027 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
KPNA1-208ENST00000485027 MT1XP80297 61 aa1.9□□□□□ -2.11
KPNA1-208ENST00000485027 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
KPNA1-208ENST00000485027 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
KPNA1-208ENST00000485027 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
KPNA1-208ENST00000485027 SPRR2EP22531 72 aa1.84□□□□□ -2.12
KPNA1-208ENST00000485027 SPRR2BP35325 72 aa1.84□□□□□ -2.12
KPNA1-208ENST00000485027 SPRR2AP35326 72 aa1.84□□□□□ -2.12
KPNA1-208ENST00000485027 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
KPNA1-208ENST00000485027 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
KPNA1-208ENST00000485027 SPRR2DP22532 72 aa1.79□□□□□ -2.12
KPNA1-208ENST00000485027 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
KPNA1-208ENST00000485027 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
KPNA1-208ENST00000485027 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
KPNA1-208ENST00000485027 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
KPNA1-208ENST00000485027 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
KPNA1-208ENST00000485027 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
KPNA1-208ENST00000485027 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
KPNA1-208ENST00000485027 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.13
KPNA1-208ENST00000485027 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
KPNA1-208ENST00000485027 MT1EP04732 61 aa1.68□□□□□ -2.14
KPNA1-208ENST00000485027 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
KPNA1-208ENST00000485027 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
KPNA1-208ENST00000485027 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
KPNA1-208ENST00000485027 MT1LQ93083 61 aa1.61□□□□□ -2.15
KPNA1-208ENST00000485027 MT1GP13640 62 aa1.59□□□□□ -2.15
KPNA1-208ENST00000485027 MT1MQ8N339 61 aa1.59□□□□□ -2.15
KPNA1-208ENST00000485027 MT4P47944 62 aa1.57□□□□□ -2.16
KPNA1-208ENST00000485027 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
KPNA1-208ENST00000485027 PRM1P04553 51 aa1.47□□□□□ -2.17
KPNA1-208ENST00000485027 MT1AP04731 61 aa1.46□□□□□ -2.18
KPNA1-208ENST00000485027 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
KPNA1-208ENST00000485027 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
KPNA1-208ENST00000485027 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
KPNA1-208ENST00000485027 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
KPNA1-208ENST00000485027 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
KPNA1-208ENST00000485027 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
KPNA1-208ENST00000485027 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
KPNA1-208ENST00000485027 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
KPNA1-208ENST00000485027 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 7.3 ms